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DQ845390.1__ABH10667.1__X__00001

Bact-Vir

DQ845390.1__ABH10667.1__X__00001

Identity

Accession:
DQ845390 ↗
Kingdom:
phage

Quality

86.3 mean pLDDT

Taxonomy

Klebsiella_phage_KPP95

TaxID: 264484

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-79
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r5uC00 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.82 73.0 5.97e-01 100.0% 55.1%
3bgwA01 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.81 68.0 5.71e-01 100.0% 55.0%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.66 44.0 4.76e-01 97.5% 85.5%
2hsbA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.64 47.0 4.06e-01 78.5% 73.0%
3nrwA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.62 48.0 4.41e-01 84.8% 99.0%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 40.0 3.47e-01 75.9% 53.8%
7v7yA01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.55 46.0 3.06e-01 88.6% 87.1%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.54 36.0 3.96e-01 70.9% 87.3%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 37.0 3.33e-01 75.9% 49.6%
1rypA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 49.0 3.43e-01 100.0% 64.6%
3unbF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 49.0 3.43e-01 100.0% 35.7%
1qqfA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 46.0 3.23e-01 100.0% 47.8%
1gt0D00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.53 33.0 3.36e-01 91.1% 63.3%
3vwaA03 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 40.0 2.74e-01 83.5% 39.3%
3djbA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.52 41.0 3.92e-01 88.6% 83.3%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3056106 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.99 97.0 7.48e-01 100.0% 53.4%
3947982 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.90 83.0 6.59e-01 100.0% 55.3%
4132802 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.86 77.0 6.07e-01 100.0% 50.0%
4194684 507.1.1.6 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB_C 0.84 77.0 4.64e-01 100.0% 17.1%
4272859 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.83 74.0 5.93e-01 100.0% 52.4%
2979225 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.83 73.0 5.57e-01 100.0% 43.2%
4995771 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.83 76.0 6.12e-01 100.0% 55.2%
3222 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.82 73.0 6.64e-01 100.0% 74.5%
1166510 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.81 72.0 5.54e-01 100.0% 44.7%
1695201 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.80 68.0 5.32e-01 100.0% 45.0%
137909 507.1.1.1 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.80 68.0 5.81e-01 100.0% 59.0%
4561994 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.77 65.0 5.44e-01 100.0% 55.4%
4083042 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.75 61.0 5.28e-01 100.0% 58.3%
5011373 2004.1.1.342 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_10 0.73 62.0 3.97e-01 92.4% 21.9%
4048993 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.71 62.0 5.09e-01 100.0% 52.4%
5001714 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.71 58.0 3.62e-01 87.3% 17.3%
5058493 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.71 59.0 3.69e-01 91.1% 18.2%
4982833 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.70 57.0 3.69e-01 88.6% 23.4%
4243827 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.70 60.0 4.98e-01 100.0% 54.8%
4937513 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.68 56.0 3.50e-01 91.1% 16.9%
5036033 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 55.0 3.44e-01 87.3% 16.3%
4970797 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 57.0 3.59e-01 91.1% 19.7%
4967176 601.7.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.67 48.0 4.17e-01 74.7% 69.7%
5026703 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.67 57.0 3.60e-01 91.1% 20.0%
4971640 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 54.0 3.44e-01 92.4% 19.5%
4958393 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.64 50.0 3.20e-01 91.1% 17.6%
5001587 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.62 47.0 2.97e-01 88.6% 16.2%
5059392 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.62 49.0 3.67e-01 84.8% 90.0%
4971652 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.59 46.0 3.46e-01 84.8% 93.0%
5075793 2004.1.1.94 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 0.58 46.0 3.21e-01 83.5% 33.5%
5065597 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.57 49.0 4.01e-01 100.0% 56.9%
4971029 3960.1.1.0 ↗ alpha arrays › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain 0.56 44.0 3.64e-01 88.6% 74.7%
4941280 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.56 44.0 3.71e-01 87.3% 87.1%
3386043 610.4.1.1 ↗ alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY 0.55 48.0 3.94e-01 96.2% 62.8%
3285802 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.53 46.0 3.88e-01 100.0% 82.1%
4940179 2.21.1.3 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 0.53 42.0 3.47e-01 91.1% 76.2%
3662896 101.1.1.411 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 0.52 40.0 3.55e-01 87.3% 92.0%
1546400 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.51 41.0 3.93e-01 98.7% 73.5%
3339567 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.51 39.0 3.10e-01 84.8% 81.7%
4965979 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.50 37.0 2.52e-01 84.8% 18.8%
4940271 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.50 37.0 3.65e-01 82.3% 86.7%
D2 medium residues 87-143
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vbbE01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.75 68.0 5.31e-01 100.0% 73.9%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.74 66.0 6.09e-01 98.2% 87.3%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 67.0 5.42e-01 100.0% 54.8%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.73 65.0 5.91e-01 100.0% 80.5%
4nswB01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.72 64.0 4.15e-01 100.0% 64.8%
7lb8B02 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.72 64.0 4.00e-01 100.0% 64.8%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.72 64.0 5.86e-01 98.2% 86.3%
4dkcB00 1.20.1250.80 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 0.71 53.0 3.80e-01 96.5% 28.1%
6a95A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.70 58.0 4.48e-01 91.2% 57.1%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.70 62.0 5.62e-01 100.0% 81.8%
7sf7A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.69 61.0 3.91e-01 100.0% 30.6%
3r2qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 57.0 4.66e-01 96.5% 49.6%
6t4hA03 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.68 60.0 4.26e-01 100.0% 34.3%
3hl1A02 6.10.140.1530 Special › Helix non-globular › Helix Hairpins › 0.68 55.0 5.29e-01 91.2% 78.5%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 51.0 4.68e-01 93.0% 63.0%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.67 57.0 5.08e-01 98.2% 75.3%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.67 61.0 5.84e-01 100.0% 90.8%
3v5uA01 6.10.280.80 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region 0.67 57.0 5.25e-01 98.2% 78.9%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 57.0 4.53e-01 100.0% 48.3%
1e91A00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.65 48.0 4.24e-01 84.2% 52.9%
2q5zB00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.65 54.0 4.56e-01 94.7% 55.3%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 55.0 4.46e-01 98.2% 52.1%
1lvlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 56.0 3.80e-01 100.0% 37.3%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.64 48.0 4.25e-01 94.7% 55.2%
1xl3C00 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.62 44.0 3.88e-01 77.2% 56.0%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.62 50.0 4.90e-01 94.7% 83.6%
2bnxB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.62 47.0 3.21e-01 87.7% 20.8%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 53.0 4.95e-01 100.0% 78.9%
3n5lA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 45.0 4.52e-01 80.7% 87.7%
4ua8A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 44.0 3.09e-01 82.5% 63.0%
5dqqA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 47.0 3.69e-01 98.2% 81.1%
8d8lN01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 41.0 3.74e-01 91.2% 60.5%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.52 45.0 3.06e-01 96.5% 79.7%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3056106 507.1.1.0 ↗ alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related 0.97 93.0 6.53e-01 100.0% 38.5%
4945751 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.81 73.0 5.82e-01 100.0% 59.1%
3615252 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 70.0 4.27e-01 100.0% 18.6%
4673 192.7.1.4 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C 0.75 65.0 6.15e-01 93.0% 92.4%
4373203 605.1.1.131 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Val_tRNA-synt_C 0.75 63.0 6.02e-01 91.2% 92.3%
3770414 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.75 67.0 5.42e-01 100.0% 56.2%
3407424 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.74 61.0 4.89e-01 91.2% 50.9%
3809724 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.74 62.0 4.79e-01 100.0% 41.4%
3181110 5086.1.1.110 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA 0.74 66.0 5.54e-01 100.0% 63.2%
3625044 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.73 64.0 5.27e-01 100.0% 79.0%
3595797 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.72 61.0 5.12e-01 93.0% 58.9%
3238851 3812.1.1.0 ↗ alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE 0.71 64.0 5.22e-01 100.0% 60.0%
4195148 3757.1.1.0 ↗ extended segments › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain 0.71 56.0 4.25e-01 87.7% 37.7%
3403227 192.8.1.465 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CHD5 0.70 60.0 4.88e-01 98.2% 55.5%
4196235 159.1.1.1 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG 0.69 55.0 4.60e-01 87.7% 58.0%
4976290 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.69 55.0 4.97e-01 100.0% 63.7%
5012157 605.1.1.354 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MS_channel_1st_1 0.69 61.0 5.37e-01 100.0% 70.6%
4941837 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.68 62.0 4.69e-01 100.0% 49.2%
3575376 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.68 60.0 5.08e-01 100.0% 70.5%
3601336 5073.1.1.0 ↗ alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M 0.68 61.0 3.62e-01 100.0% 14.1%
3580010 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 51.0 3.03e-01 80.7% 23.4%
3421046 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 57.0 4.97e-01 96.5% 63.3%
3588068 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.67 56.0 4.95e-01 100.0% 77.8%
5019788 5050.1.1.86 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › LysE 0.65 54.0 3.76e-01 100.0% 60.9%
3958744 604.24.1.1 ↗ alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C 0.64 55.0 4.59e-01 98.2% 55.0%
3517701 10.12.1.101 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 0.62 53.0 3.32e-01 96.5% 92.1%
3171363 605.8.1.2 ↗ alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › PF27894 0.62 46.0 4.74e-01 82.5% 87.3%
5062246 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.61 52.0 4.32e-01 98.2% 86.7%
D3 medium residues 158-243
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11242.15 best DUF2774 100.2 7.70e-29 84.9% 94.6%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.69e-01 73.3% 87.5%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.44e-01 74.4% 82.3%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.43e-01 75.6% 74.8%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.32e-01 72.1% 75.9%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.36e-01 73.3% 76.2%
3um7A03 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 36.0 3.42e-01 72.1% 63.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4934485 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.80 55.0 5.94e-01 70.9% 93.2%
3376425 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.79 55.0 5.62e-01 72.1% 89.4%
4970998 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.68 48.0 4.56e-01 73.3% 79.0%
3983783 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.67 50.0 4.85e-01 79.1% 81.1%
3314861 101.1.1.267 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.64 56.0 4.95e-01 93.0% 76.7%
3998880 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 45.0 4.36e-01 73.3% 77.9%
1291586 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.54 39.0 3.34e-01 75.6% 86.3%