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DQ845394.1__ABH10671.1__X__00001

Bact-Vir

DQ845394.1__ABH10671.1__X__00001

Identity

Accession:
DQ845394 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Klebsiella_phage_KPP95

TaxID: 264484

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-195
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21560.3 best Gp34_2nd 51.7 1.10e-13 87.3% 95.1%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.63 33.0 4.08e-01 77.8% 81.0%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.60 37.0 3.49e-01 84.1% 50.7%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 28.0 3.51e-01 86.5% 90.6%
3p51A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 40.0 3.84e-01 98.4% 69.0%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 40.0 3.65e-01 100.0% 62.2%
4mb8D00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.51 42.0 3.22e-01 89.7% 76.2%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.51 29.0 3.12e-01 81.7% 62.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2417913 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.84 77.0 5.21e-01 100.0% 30.3%
1841021 243.19.1.1 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › Gp34_2nd 0.84 73.0 7.62e-01 95.2% 99.1%
5045707 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 34.0 4.21e-01 92.9% 93.3%
1283151 3692.1.1.1 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.58 36.0 3.72e-01 84.1% 65.5%
4098591 243.3.1.7 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Xylo_C 0.57 36.0 4.00e-01 82.5% 80.0%
3391303 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 39.0 2.79e-01 93.7% 25.8%
3687798 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 30.0 3.35e-01 82.5% 73.7%
D2 medium residues 1-53
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.54 37.0 3.14e-01 71.7% 67.4%
1z2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 2.95e-01 86.8% 49.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2832047 3255.1.1.1 ↗ a/b three-layered sandwiches › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › FHIPEP 0.53 36.0 2.98e-01 73.6% 56.4%
3187312 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 41.0 2.52e-01 96.2% 42.8%
3477885 109.1.1.29 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Tom37+GST_C_6 0.51 39.0 2.67e-01 92.5% 75.7%