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DUF3609
Euk-VirAgrotis_segetum_granulovirus
DUF3609__YP_009513058__Agrotis_segetum_granulovirus__10464
Identity
- Accession:
- YP_009513058 ↗
- Protein ID:
- DUF3609
- Kingdom:
- euk
Quality
72.8
mean pLDDT
Taxonomy
TaxID: 10464
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-52_315-408_473-517
Domain cluster:
rep: F_protein__YP_009666631__Oxyplax_ochracea_nucleopolyhedrovirus__2083176__D30-53_312-432_486-549
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 127.6 | 8.60e-37 | 60.7% | 16.3% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b9bA01 | 2.40.490.10 | Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain | 0.73 | 47.0 | 5.53e-01 | 78.5% | 93.0% |
| 4e5xG00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 24.0 | 2.99e-01 | 84.0% | 61.6% |
| 4dzoA02 | 3.30.457.60 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.51 | 25.0 | 3.53e-01 | 77.3% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3407194 | 5093.1.1.2 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Baculo_F | 0.84 | 63.0 | 4.63e-01 | 77.3% | 99.0% |
| 2722705 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.65 | 53.0 | 3.85e-01 | 87.1% | 92.7% |
| 2868232 | 5093.1.1.1 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly | 0.65 | 53.0 | 3.89e-01 | 87.1% | 96.5% |
| 5000503 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.58 | 33.0 | 4.10e-01 | 71.8% | 90.0% |
| 5016920 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.50 | 19.0 | 2.59e-01 | 73.0% | 64.1% |
D2
medium
residues 53-63_160-187_245-314
Domain cluster:
rep: efp__YP_009121808__Spodoptera_frugiperda_granulovirus__307454__D173-206_260-322
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 75.3 | 5.90e-21 | 67.0% | 11.7% |
| PF12259.14 | Baculo_F | 28.9 | 6.70e-07 | 38.5% | 4.9% |
D3
medium
residues 64-131_188-244
Domain cluster:
rep: EFP__YP_009330159__Plodia_interpunctella_granulovirus__262175__D118-140_156-184_241-293
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 36.2 | 4.20e-09 | 56.8% | 11.0% |
| PF12259.14 | Baculo_F | 41.1 | 1.40e-10 | 47.2% | 9.5% |
D4
medium
residues 409-472
Domain cluster:
rep: efp__YP_009121808__Spodoptera_frugiperda_granulovirus__307454__D424-487
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12259.14 best | Baculo_F | 76.3 | 3.00e-21 | 100.0% | 10.8% |