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DUF832

Euk-Vir

Phascolarctid_gammaherpesvirus_1

DUF832__YP_010087489__Phascolarctid_gammaherpesvirus_1__2249313

Identity

Accession:: YP_010087489 ↗
Protein ID:: DUF832
Kingdom:: euk

Quality

63.9 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Manticavirus› Phascolarctid_gammaherpesvirus_1

TaxID: 2249313

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-218

PDB

Domain cluster: rep: JM79__YP_238382__Macaca_fuscata_rhadinovirus__272551__D112-214

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05734.17 best	DUF832	36.5	5.40e-09	99.1%	47.4%

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7ys6A01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.61	48.0	3.68e-01	85.7%	99.3%
3lcnB00	1.10.340.40	Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain	0.58	37.0	3.99e-01	95.5%	74.2%
3lmfA00	1.20.1270.360	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.58	45.0	4.59e-01	100.0%	84.4%
2kiwA01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.57	35.0	3.92e-01	98.2%	80.2%
1fbwA01	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.54	48.0	3.30e-01	100.0%	97.6%
4djhA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.53	41.0	3.13e-01	83.9%	69.7%
2vmaA00	1.20.81.30	Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F	0.53	37.0	3.64e-01	76.8%	66.4%
3ajmB02	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.52	41.0	3.90e-01	83.0%	94.7%
4im7A02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.51	38.0	3.18e-01	78.6%	86.5%
1r2jA03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.51	46.0	4.27e-01	100.0%	77.1%
3bt5A00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.51	42.0	3.86e-01	99.1%	68.2%
1h6gA01	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.50	38.0	3.79e-01	81.2%	74.8%
1a87A02	1.10.490.30	Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin	0.50	44.0	3.71e-01	100.0%	65.0%
2iw3A02	1.20.1390.20	Mainly Alpha › Up-down Bundle › PWI domain ›	0.50	36.0	3.94e-01	99.1%	94.4%
1aepA00	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.50	45.0	4.04e-01	100.0%	71.9%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3246157	5001.1.1.41 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw	0.64	51.0	3.58e-01	85.7%	85.8%
5010969	5069.1.1.105 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF973	0.62	46.0	4.29e-01	78.6%	84.8%
3228384	544.1.1.0 ↗	alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18	0.61	43.0	4.37e-01	100.0%	72.6%
3969522	604.5.1.0 ↗	alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895)	0.57	45.0	3.81e-01	100.0%	50.0%
5065387	633.21.1.0 ↗	alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107	0.55	49.0	4.92e-01	100.0%	95.6%
3814488	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.55	35.0	3.54e-01	96.4%	63.6%
3277674	109.3.1.377 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF26994	0.55	43.0	3.96e-01	100.0%	64.8%
3232630	5001.1.1.44 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv	0.55	42.0	3.16e-01	83.0%	63.3%
4411663	3584.1.1.1 ↗	alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger	0.54	47.0	3.74e-01	100.0%	46.0%
3815191	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.54	49.0	4.37e-01	100.0%	78.5%
461801	5000.3.1.3 ↗	alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Poxv_Bcl-2-like	0.54	37.0	3.38e-01	100.0%	52.3%
3411201	601.1.1.5 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › CAS_C	0.53	40.0	3.42e-01	78.6%	97.2%
3784455	627.1.1.1 ↗	alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › VPS9	0.53	40.0	3.55e-01	100.0%	53.5%
3733145	633.23.1.0 ↗	alpha bundles › Bromodomain-like › Claudin › Claudin	0.52	47.0	4.41e-01	100.0%	80.7%
4976355	3352.1.1.2 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2	0.51	43.0	3.18e-01	97.3%	57.3%
None	—		0.50	45.0	3.19e-01	100.0%	95.6%

D2 medium residues 11-106_219-308

PDB

Domain cluster: rep: DUF832__YP_010087416__Vombatid_gammaherpesvirus_1__2052651__D11-76_220-289_301-306