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Desmoplakin

Euk-Vir

Lonomia_obliqua_multiple_nucleopolyhedrovirus

Desmoplakin__YP_009666437__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394

Identity

Accession:: YP_009666437 ↗
Protein ID:: Desmoplakin
Kingdom:: euk

Quality

68.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lonomia_obliqua_multiple_nucleopolyhedrovirus

TaxID: 134394

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 173-231

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3i1aA03	1.20.58.840	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.70	47.0	3.84e-01	71.2%	45.7%
1tfkB00	1.20.120.650	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D	0.65	45.0	3.97e-01	71.2%	70.9%
1w53A00	1.10.1240.30	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain	0.65	56.0	5.02e-01	96.6%	89.3%
6jlzA01	1.20.120.1070	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain	0.65	48.0	4.06e-01	83.1%	45.4%
1fouA01	1.10.246.30	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.60	54.0	5.02e-01	100.0%	97.3%
1vhnA02	1.10.1200.80	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2	0.60	45.0	4.33e-01	88.1%	70.4%
2jbwA01	1.20.1440.110	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase	0.59	48.0	4.06e-01	93.2%	91.3%
2bl2A00	1.20.120.610	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase	0.53	44.0	3.33e-01	96.6%	69.2%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4175653	5069.1.3.4 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › CybS	0.80	70.0	5.56e-01	98.3%	65.5%
5027767	601.33.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain	0.77	68.0	5.60e-01	98.3%	66.7%
5046243	106.1.1.2 ↗	alpha arrays › Globin-like › Globin-like › Globin-like › Phycobilisome	0.72	61.0	4.80e-01	93.2%	88.3%
3240148	3343.1.1.3 ↗	alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_N_terminal	0.71	63.0	3.60e-01	100.0%	39.5%
5022880	101.1.11.2 ↗	alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1	0.66	47.0	4.46e-01	74.6%	88.6%
3316618	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.63	42.0	4.02e-01	78.0%	58.6%
4013091	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.63	50.0	3.87e-01	94.9%	40.6%
3437546	198.1.1.2 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1	0.61	44.0	4.02e-01	78.0%	62.5%
3396076	198.1.1.2 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1	0.60	43.0	4.02e-01	76.3%	68.0%
4402941	101.32.1.1 ↗	alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD	0.59	49.0	3.79e-01	98.3%	55.2%
4196088	150.1.1.175 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › BREX_BrxC_helical	0.56	41.0	3.55e-01	81.4%	66.7%

D2 medium residues 320-443

PDB

Domain cluster: representative

D3 medium residues 444-568

PDB

Domain cluster: representative