DnaQ_like_exonuclease

Euk-Vir

Pandoravirus_dulcis

DnaQ_like_exonuclease__YP_008319119__Pandoravirus_dulcis__1349409

Identity

63.9 mean pLDDT

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

View cluster (3 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 82-149

PDB

D2 high residues 516-589

PDB

D3 medium residues 150-173_220-275_349-374

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yz6A02	1.10.150.190	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2	0.61	41.0	4.46e-01	95.3%	85.1%
6whpA01	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.57	39.0	2.95e-01	70.8%	93.1%
3a06B03	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.56	29.0	3.20e-01	84.9%	59.1%
5hmlA02	1.10.150.20	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain	0.53	36.0	3.98e-01	94.3%	92.5%
1mhyG02	1.20.1280.30	Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2	0.52	33.0	3.85e-01	98.1%	91.8%
2hjjA00	3.30.160.130	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains	0.52	32.0	3.87e-01	93.4%	100.0%

D4 medium residues 276-348_375-494

PDB

Domain cluster: rep: DEDDy_3-5_exonuclease_domain-containing__YP_009165206__Mollivirus_sibericum_Viruses.__X__D187-220_261-377

D5 medium residues 621-751_831-850

PDB

Domain cluster: rep: PH2015_10_scaffold_0_prodigal-single.1__X__X__00129__D1-123

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01612.27 best	DNA_pol_A_exo1	39.4	7.70e-10	80.8%	63.6%

D6 medium residues 752-830

PDB