E1B-55k

Euk-Vir

Deer_mastadenovirus_B

E1B-55k__YP_009373235__Deer_mastadenovirus_B__2170000

Identity

82.9 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Deer_mastadenovirus_B

TaxID: 2170000

View cluster (36 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 294-405

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01696.24 best	Adeno_E1B_55K	123.7	1.10e-35	100.0%	28.9%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3bh7B01	2.160.20.70	Mainly Beta › 3 Solenoid › Pectate Lyase C-like ›	0.59	51.0	4.21e-01	92.9%	92.2%
4c2lA00	2.160.20.10	Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like	0.58	52.0	3.62e-01	99.1%	53.8%
4ofyD03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	27.0	2.92e-01	75.9%	57.3%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3828319	207.2.1.1 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28	0.59	52.0	3.44e-01	97.3%	43.3%
4882343	2003.1.1.59 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_5	0.58	40.0	2.96e-01	72.3%	73.9%
3941286	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.57	50.0	3.89e-01	97.3%	56.7%
3270371	2003.6.1.1 ↗	a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB	0.56	45.0	3.26e-01	86.6%	84.8%
4021625	7579.1.1.0 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases	0.54	46.0	2.99e-01	95.5%	76.3%
4012569	7579.1.1.89 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE	0.53	44.0	2.84e-01	92.0%	76.1%
4386723	207.2.1.35 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DUF4097	0.53	46.0	3.57e-01	97.3%	43.7%
3639076	208.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes	0.52	46.0	3.91e-01	96.4%	74.4%