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E1
Euk-VirCapreolus_capreolus_papillomavirus_1
E1__YP_002004569__Capreolus_capreolus_papillomavirus_1__470214
Identity
- Accession:
- YP_002004569 ↗
- Protein ID:
- E1
- Kingdom:
- euk
Quality
76.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Deltapapillomavirus›
Capreolus_capreolus_papillomavirus_1
TaxID: 470214
Cluster
View cluster (151 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 407-582
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 288.0 | 1.10e-85 | 100.0% | 60.6% |
| PF01057.24 | Parvo_NS1 | 48.7 | 7.30e-13 | 99.4% | 62.7% |
| PF19263.6 | DUF5906 | 31.4 | 3.70e-07 | 58.5% | 89.4% |
D2
medium
residues 174-307
Domain cluster:
rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20450.5 best | PPV_E1_DBD | 151.3 | 3.00e-44 | 100.0% | 94.3% |
D3
medium
residues 313-381
Domain cluster:
rep: putative_E1_protein__YP_009021236__Canis_familiaris_papillomavirus_13__1226723__D314-376
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 98.0 | 8.30e-28 | 98.6% | 22.8% |