E1

Euk-Vir

Rangifer_tarandus_papillomavirus_2

E1__YP_008378668__Rangifer_tarandus_papillomavirus_2__1370094

Identity

77.8 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Xipapillomavirus› Rangifer_tarandus_papillomavirus_2

TaxID: 1370094

View cluster (151 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 166-288

PDB

Domain cluster: rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF20450.5 best	PPV_E1_DBD	159.6	8.00e-47	100.0%	87.9%

D2 medium residues 302-364

PDB

Domain cluster: rep: putative_E1_protein__YP_009021236__Canis_familiaris_papillomavirus_13__1226723__D314-376

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	95.5	4.50e-27	100.0%	21.4%

D3 medium residues 366-443_533-566

PDB

Domain cluster: rep: E1__YP_717903__Canis_familiaris_papillomavirus_3__360397__D413-471_566-595

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01057.24 best	Parvo_NS1	25.4	9.20e-06	79.5%	20.3%
PF00519.24	PPV_E1_C	116.9	1.40e-33	72.3%	27.0%
PF00519.24	PPV_E1_C	28.8	9.70e-07	31.2%	11.8%

D4 medium residues 444-532

PDB

Domain cluster: rep: E1_protein__YP_009508768__Rusa_timorensis_papillomavirus_type_1__1776868__D435-518

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	141.8	3.60e-41	100.0%	30.8%