E1

Euk-Vir

Pygoscelis_adeliae_papillomavirus_1

E1__YP_009022073__Pygoscelis_adeliae_papillomavirus_1__1480065

Identity

69.9 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Treisepsilonpapillomavirus› Pygoscelis_adeliae_papillomavirus_1

TaxID: 1480065

View cluster (151 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 235-375

PDB

Domain cluster: rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF20450.5 best	PPV_E1_DBD	106.1	2.70e-30	91.5%	94.3%

D2 high residues 380-446

PDB

Domain cluster: rep: putative_E1_protein__YP_009021236__Canis_familiaris_papillomavirus_13__1226723__D314-376

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	100.8	1.10e-28	100.0%	22.1%

D3 medium residues 448-499_623-666

PDB

Domain cluster: rep: E1__YP_004169265__Human_papillomavirus_type_128__931209__D372-424_556-584

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	28.5	1.20e-06	63.5%	16.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4235807	3236.2.1.8 ↗	alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › Asp-Al_Ex	0.60	47.0	3.21e-01	86.5%	83.2%

D4 medium residues 500-622

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	179.7	1.10e-52	100.0%	41.5%