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E1
Euk-VirRattus_norvegicus_papillomavirus_3
E1__YP_009182326__Rattus_norvegicus_papillomavirus_3__1756445
Identity
- Accession:
- YP_009182326 ↗
- Protein ID:
- E1
- Kingdom:
- euk
Quality
76.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Iotapapillomavirus›
Rattus_norvegicus_papillomavirus_3
TaxID: 1756445
Cluster
View cluster (151 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 145-295
Domain cluster:
rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20450.5 best | PPV_E1_DBD | 179.5 | 5.90e-53 | 89.4% | 95.7% |
D2
high
residues 308-370
Domain cluster:
rep: putative_E1_protein__YP_009021236__Canis_familiaris_papillomavirus_13__1226723__D314-376
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 101.9 | 5.10e-29 | 100.0% | 21.4% |
D3
high
residues 390-571
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 314.8 | 7.20e-94 | 100.0% | 63.0% |
| PF01057.24 | Parvo_NS1 | 41.0 | 1.60e-10 | 95.6% | 46.1% |
| PF19263.6 | DUF5906 | 29.3 | 1.60e-06 | 59.3% | 92.9% |