←Back to structures
E1
Euk-VirTrichechus_manatus_latirostris_papillomavirus_3
E1__YP_009507320__Trichechus_manatus_latirostris_papillomavirus_3__2848316
Identity
- Accession:
- YP_009507320 ↗
- Protein ID:
- E1
- Kingdom:
- euk
Quality
75.8
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Rhopapillomavirus›
Trichechus_manatus_latirostris_papillomavirus_3
TaxID: 2848316
Cluster
View cluster (151 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 168-323
Domain cluster:
rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20450.5 best | PPV_E1_DBD | 174.1 | 2.70e-51 | 87.2% | 96.4% |
D2
high
residues 336-398
Domain cluster:
rep: putative_E1_protein__YP_009021236__Canis_familiaris_papillomavirus_13__1226723__D314-376
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 94.7 | 8.30e-27 | 100.0% | 21.1% |
D3
high
residues 404-606
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 331.1 | 7.40e-99 | 100.0% | 70.2% |
| PF01057.24 | Parvo_NS1 | 39.5 | 4.70e-10 | 90.6% | 48.0% |