E1

Euk-Vir

Canis_familiaris_papillomavirus_3

E1__YP_717903__Canis_familiaris_papillomavirus_3__360397

Identity

75.2 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Chipapillomavirus› Canis_familiaris_papillomavirus_3

TaxID: 360397

View cluster (151 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 173-322

PDB

Domain cluster: rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF20450.5 best	PPV_E1_DBD	171.8	1.40e-50	90.0%	95.7%

D2 high residues 336-398

PDB

Domain cluster: rep: putative_E1_protein__YP_009021236__Canis_familiaris_papillomavirus_13__1226723__D314-376

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	102.1	4.40e-29	100.0%	21.4%

D3 medium residues 413-471_566-595

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	77.4	1.50e-21	67.4%	20.1%
PF00519.24	PPV_E1_C	28.9	9.30e-07	36.0%	10.4%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1tueD00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.99	96.0	6.99e-01	100.0%	90.6%
3cnhB02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.54	37.0	4.06e-01	88.8%	94.1%
4d7rA01	1.10.220.20	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 ›	0.52	31.0	3.22e-01	93.3%	63.4%
2pjrA03	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.51	30.0	2.85e-01	86.5%	46.2%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
9753	2004.1.1.48 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PPV_E1_C	0.98	95.0	6.93e-01	100.0%	89.1%
3588896	2004.1.1.206 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31	0.53	41.0	2.96e-01	85.4%	89.6%

D4 medium residues 472-565

PDB

Domain cluster: rep: E1_protein__YP_009508768__Rusa_timorensis_papillomavirus_type_1__1776868__D435-518

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	160.1	9.50e-47	100.0%	32.2%