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E1_protein
Euk-VirOmikronpapillomavirus_1
E1_protein__NP_542617__Omikronpapillomavirus_1__82676
Identity
- Accession:
- NP_542617 ↗
- Protein ID:
- E1_protein
- Kingdom:
- euk
Quality
74.5
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Omikronpapillomavirus›
Omikronpapillomavirus_1
TaxID: 82676
Cluster
View cluster (151 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 195-329
Domain cluster:
rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20450.5 best | PPV_E1_DBD | 180.3 | 3.40e-53 | 94.1% | 90.0% |
D2
high
residues 431-622
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 337.0 | 1.20e-100 | 100.0% | 65.7% |
| PF01057.24 | Parvo_NS1 | 38.8 | 7.40e-10 | 75.0% | 48.0% |
D3
medium
residues 330-430
Domain cluster:
rep: E1__YP_009551932__Gammapapillomavirus_sp.__2049444__D312-408
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 135.6 | 2.80e-39 | 84.2% | 28.7% |