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E1_protein
Euk-VirSus_scrofa_papillomavirus_2
E1_protein__YP_009408612__Sus_scrofa_papillomavirus_2__2025338
Identity
- Accession:
- YP_009408612 ↗
- Protein ID:
- E1_protein
- Kingdom:
- euk
Quality
76.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Sus_scrofa_papillomavirus_2
TaxID: 2025338
Cluster
View cluster (151 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 162-295
Domain cluster:
rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20450.5 best | PPV_E1_DBD | 155.8 | 1.20e-45 | 95.5% | 91.4% |
D2
medium
residues 316-378
Domain cluster:
rep: putative_E1_protein__YP_009021236__Canis_familiaris_papillomavirus_13__1226723__D314-376
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 97.0 | 1.60e-27 | 100.0% | 21.4% |
D3
medium
residues 457-538
Domain cluster:
rep: E1_protein__YP_009508768__Rusa_timorensis_papillomavirus_type_1__1776868__D435-518
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00519.24 best | PPV_E1_C | 144.5 | 5.30e-42 | 100.0% | 28.4% |