E1_protein

Euk-Vir

Cervus_elaphus_papillomavirus_2

E1_protein__YP_009508774__Cervus_elaphus_papillomavirus_2__1747359

Identity

78.3 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Xipapillomavirus› Cervus_elaphus_papillomavirus_2

TaxID: 1747359

View cluster (151 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 157-295

PDB

Domain cluster: rep: E1__YP_004306475__Camelus_dromedarius_papillomavirus_2__996651__D192-336

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF20450.5 best	PPV_E1_DBD	178.2	1.50e-52	95.7%	94.3%

D2 medium residues 296-390

PDB

Domain cluster: rep: E1__YP_009551932__Gammapapillomavirus_sp.__2049444__D312-408

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	122.3	3.20e-35	89.5%	28.4%

D3 medium residues 391-424_556-575

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	42.1	8.80e-11	70.4%	12.5%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3qnmA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.59	46.0	3.87e-01	85.2%	86.7%
1xs9D00	1.10.150.20	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain	0.51	39.0	3.59e-01	98.1%	61.7%
1r69A00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.51	36.0	3.46e-01	75.9%	98.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3249725	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.51	36.0	3.17e-01	75.9%	97.6%

D4 medium residues 425-555

PDB

Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00519.24 best	PPV_E1_C	213.8	4.20e-63	100.0%	44.6%
PF01057.24	Parvo_NS1	25.4	9.10e-06	84.7%	36.2%