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E2
Euk-VirSparus_aurata_papillomavirus_1
E2__YP_009272701__Sparus_aurata_papillomavirus_1__1885928
Identity
- Accession:
- YP_009272701 ↗
- Protein ID:
- E2
- Kingdom:
- euk
Quality
73.2
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Alefpapillomavirus›
Sparus_aurata_papillomavirus_1
TaxID: 1885928
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 227-298
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00511.23 best | PPV_E2_C | 27.4 | 4.30e-06 | 88.9% | 82.5% |
CATH (99)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.92 | 84.0 | 7.91e-01 | 97.2% | 92.9% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.75 | 64.0 | 5.28e-01 | 95.8% | 54.2% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 65.0 | 6.11e-01 | 98.6% | 93.3% |
| 2djwA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.74 | 65.0 | 6.52e-01 | 98.6% | 97.3% |
| 2zbcA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.74 | 64.0 | 6.39e-01 | 97.2% | 97.3% |
| 2cpxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.73 | 63.0 | 6.16e-01 | 95.8% | 98.7% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 65.0 | 5.76e-01 | 98.6% | 76.7% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.73 | 64.0 | 5.89e-01 | 98.6% | 74.7% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 65.0 | 5.96e-01 | 98.6% | 97.8% |
| 3nwgA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.73 | 64.0 | 5.75e-01 | 98.6% | 77.2% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 65.0 | 5.83e-01 | 100.0% | 86.9% |
| 2cqiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.73 | 64.0 | 5.69e-01 | 98.6% | 75.7% |
| 2cg4A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.72 | 64.0 | 6.10e-01 | 100.0% | 92.9% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.72 | 64.0 | 6.09e-01 | 100.0% | 95.2% |
| 2ia0B02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.72 | 63.0 | 5.67e-01 | 97.2% | 73.7% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.72 | 63.0 | 5.96e-01 | 97.2% | 89.4% |
| 2bj3D02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.72 | 61.0 | 5.91e-01 | 95.8% | 90.1% |
| 2jsxA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.72 | 63.0 | 6.33e-01 | 97.2% | 98.6% |
| 3hluA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 63.0 | 6.32e-01 | 97.2% | 98.6% |
| 1fjcA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 63.0 | 5.80e-01 | 100.0% | 82.3% |
| 2ghpA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 63.0 | 6.06e-01 | 97.2% | 95.1% |
| 2gqqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.72 | 62.0 | 5.91e-01 | 97.2% | 87.1% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.72 | 60.0 | 5.78e-01 | 95.8% | 89.4% |
| 2go9A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 62.0 | 6.09e-01 | 97.2% | 98.7% |
| 2cfxA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.72 | 59.0 | 5.54e-01 | 97.2% | 74.4% |
| 3to8A02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 63.0 | 5.68e-01 | 95.8% | 83.3% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 61.0 | 5.47e-01 | 95.8% | 92.2% |
| 4p6qA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 60.0 | 5.98e-01 | 95.8% | 98.7% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 62.0 | 6.19e-01 | 95.8% | 96.0% |
| 3n79A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.71 | 62.0 | 6.12e-01 | 98.6% | 93.6% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.71 | 62.0 | 5.55e-01 | 98.6% | 97.1% |
| 2e44A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 60.0 | 5.97e-01 | 94.4% | 98.7% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 59.0 | 5.90e-01 | 93.1% | 100.0% |
| 2m9kA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 61.0 | 5.69e-01 | 98.6% | 84.9% |
| 1hl6C00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.71 | 63.0 | 5.42e-01 | 98.6% | 69.4% |
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 62.0 | 6.01e-01 | 100.0% | 92.7% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.70 | 59.0 | 6.15e-01 | 95.8% | 100.0% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 60.0 | 5.52e-01 | 98.6% | 90.7% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.70 | 61.0 | 5.61e-01 | 100.0% | 86.5% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.70 | 60.0 | 5.46e-01 | 98.6% | 99.0% |
| 2jvrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 60.0 | 5.88e-01 | 97.2% | 95.0% |
| 2rt3A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 61.0 | 5.55e-01 | 97.2% | 74.2% |
| 2jx2A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 62.0 | 5.83e-01 | 98.6% | 82.8% |
| 1ayeA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.70 | 60.0 | 5.47e-01 | 98.6% | 70.7% |
| 3to8A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 61.0 | 5.41e-01 | 97.2% | 72.8% |
| 4nohA01 | 3.30.70.3060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 59.0 | 5.93e-01 | 95.8% | 95.8% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 60.0 | 5.65e-01 | 98.6% | 83.3% |
| 2dgwA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 62.0 | 5.99e-01 | 98.6% | 95.0% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 59.0 | 5.39e-01 | 95.8% | 91.7% |
| 2krbA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 58.0 | 5.62e-01 | 93.1% | 100.0% |
| 2f9jA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 59.0 | 5.72e-01 | 95.8% | 93.8% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 60.0 | 5.49e-01 | 98.6% | 91.6% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.69 | 59.0 | 5.59e-01 | 98.6% | 89.7% |
| 2re1A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 60.0 | 6.00e-01 | 98.6% | 98.6% |
| 2mzrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 60.0 | 5.48e-01 | 97.2% | 81.1% |
| 5d77A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 61.0 | 5.89e-01 | 100.0% | 98.8% |
| 2qz8A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.68 | 59.0 | 5.73e-01 | 98.6% | 87.7% |
| 3ewgA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.68 | 57.0 | 5.56e-01 | 95.8% | 87.5% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 57.0 | 5.70e-01 | 97.2% | 100.0% |
| 2n3lA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 59.0 | 5.55e-01 | 100.0% | 86.5% |
| 2dgvA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 58.0 | 5.51e-01 | 98.6% | 89.7% |
| 2mgzA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 58.0 | 5.29e-01 | 95.8% | 80.9% |
| 5zneA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 58.0 | 5.79e-01 | 95.8% | 95.9% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.67 | 57.0 | 4.61e-01 | 100.0% | 48.6% |
| 1kwmA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.67 | 59.0 | 5.55e-01 | 100.0% | 87.5% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 55.0 | 5.36e-01 | 95.8% | 85.2% |
| 3d68A01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.66 | 58.0 | 5.36e-01 | 98.6% | 77.2% |
| 7csxA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 56.0 | 5.67e-01 | 97.2% | 100.0% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 57.0 | 5.52e-01 | 100.0% | 95.1% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 58.0 | 5.80e-01 | 98.6% | 95.9% |
| 1s79A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 56.0 | 5.10e-01 | 100.0% | 79.6% |
| 3h7hB00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.65 | 57.0 | 5.25e-01 | 100.0% | 83.2% |
| 1x4dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 56.0 | 5.04e-01 | 97.2% | 75.5% |
| 2e5gA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 55.0 | 5.58e-01 | 95.8% | 100.0% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.65 | 54.0 | 5.30e-01 | 95.8% | 87.0% |
| 7ocxC01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 53.0 | 5.30e-01 | 94.4% | 100.0% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 54.0 | 5.35e-01 | 95.8% | 96.0% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 54.0 | 5.42e-01 | 98.6% | 97.2% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 54.0 | 4.76e-01 | 95.8% | 80.6% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.64 | 53.0 | 5.09e-01 | 97.2% | 87.1% |
| 2ywwA01 | 3.30.70.140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain | 0.64 | 55.0 | 5.14e-01 | 100.0% | 79.1% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.72e-01 | 100.0% | 69.8% |
| 1f08B00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.63 | 53.0 | 4.37e-01 | 98.6% | 60.0% |
| 3d2wA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 53.0 | 5.33e-01 | 95.8% | 98.6% |
| 3wy7D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 52.0 | 4.49e-01 | 94.4% | 78.3% |
| 1kohA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 53.0 | 4.91e-01 | 100.0% | 83.5% |
| 3mtjA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 52.0 | 5.15e-01 | 97.2% | 94.7% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 50.0 | 5.01e-01 | 97.2% | 89.3% |
| 4rl1A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.62 | 52.0 | 5.23e-01 | 98.6% | 95.8% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.62 | 52.0 | 5.22e-01 | 100.0% | 95.9% |
| 1z2zA02 | 3.30.70.3160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.98e-01 | 100.0% | 83.3% |
| 3im9A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.61 | 51.0 | 5.16e-01 | 100.0% | 95.9% |
| 3tqeA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.61 | 51.0 | 5.11e-01 | 100.0% | 95.9% |
| 1vx7G00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.60 | 51.0 | 4.36e-01 | 98.6% | 65.3% |
| 1owxA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 49.0 | 4.38e-01 | 100.0% | 69.9% |
| 2nwuB01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.58 | 49.0 | 4.19e-01 | 98.6% | 81.7% |
| 3d7aA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.58 | 49.0 | 4.11e-01 | 100.0% | 80.9% |
| 1wjwA01 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.57 | 44.0 | 4.23e-01 | 88.9% | 96.5% |
| 2vfrA03 | 3.30.70.2530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 49.0 | 4.62e-01 | 98.6% | 95.4% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047839 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.79 | 71.0 | 6.87e-01 | 97.2% | 92.5% |
| 3591080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.79 | 72.0 | 6.98e-01 | 100.0% | 98.8% |
| 4986330 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.78 | 67.0 | 6.24e-01 | 97.2% | 76.7% |
| 3496728 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.77 | 69.0 | 6.36e-01 | 98.6% | 84.4% |
| 3262726 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.76 | 68.0 | 5.75e-01 | 100.0% | 69.2% |
| 3704224 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.75 | 68.0 | 6.17e-01 | 100.0% | 82.1% |
| 4142128 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.75 | 66.0 | 5.97e-01 | 100.0% | 77.0% |
| 5066425 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.75 | 66.0 | 6.41e-01 | 97.2% | 87.5% |
| 4028765 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.75 | 64.0 | 6.39e-01 | 95.8% | 97.3% |
| 3996752 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.75 | 67.0 | 5.55e-01 | 100.0% | 68.0% |
| 3224762 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.74 | 65.0 | 6.24e-01 | 100.0% | 88.2% |
| 4929060 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.74 | 65.0 | 5.88e-01 | 100.0% | 79.0% |
| 3573744 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.74 | 66.0 | 6.03e-01 | 100.0% | 84.2% |
| 4496159 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.74 | 65.0 | 4.48e-01 | 98.6% | 30.9% |
| 4963330 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.74 | 64.0 | 6.21e-01 | 97.2% | 88.7% |
| 3254124 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.74 | 64.0 | 5.45e-01 | 98.6% | 68.3% |
| 3931019 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.73 | 64.0 | 5.56e-01 | 100.0% | 74.8% |
| 4220649 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.73 | 64.0 | 5.73e-01 | 100.0% | 73.3% |
| 3251848 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.73 | 65.0 | 5.85e-01 | 100.0% | 79.0% |
| 5079366 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.73 | 63.0 | 6.20e-01 | 97.2% | 88.6% |
| 3607428 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.73 | 62.0 | 5.44e-01 | 95.8% | 70.0% |
| 5029940 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 65.0 | 6.27e-01 | 100.0% | 90.0% |
| 3494897 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.73 | 65.0 | 5.65e-01 | 100.0% | 70.9% |
| 3274559 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 64.0 | 6.23e-01 | 98.6% | 97.5% |
| 3860694 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 63.0 | 5.64e-01 | 95.8% | 76.0% |
| 3517530 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 64.0 | 5.68e-01 | 100.0% | 79.0% |
| 4939641 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.72 | 63.0 | 6.11e-01 | 98.6% | 90.0% |
| 4532856 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 65.0 | 5.12e-01 | 100.0% | 53.8% |
| 5051276 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 63.0 | 6.12e-01 | 98.6% | 87.5% |
| 3389186 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 63.0 | 5.29e-01 | 98.6% | 62.4% |
| 3496071 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.72 | 64.0 | 5.94e-01 | 100.0% | 78.9% |
| 3235989 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 63.0 | 4.41e-01 | 98.6% | 36.1% |
| 3231887 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.72 | 63.0 | 6.17e-01 | 100.0% | 96.2% |
| 3232755 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.72 | 63.0 | 6.16e-01 | 98.6% | 97.5% |
| 4972707 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.72 | 63.0 | 5.98e-01 | 98.6% | 83.5% |
| 3173247 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 64.0 | 5.73e-01 | 100.0% | 81.0% |
| 4098712 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.71 | 61.0 | 6.06e-01 | 97.2% | 92.0% |
| 164601 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.71 | 63.0 | 5.75e-01 | 100.0% | 81.2% |
| 3247890 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.71 | 61.0 | 5.75e-01 | 98.6% | 85.6% |
| 4007701 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.71 | 63.0 | 3.84e-01 | 100.0% | 17.0% |
| 3847446 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.71 | 63.0 | 5.69e-01 | 100.0% | 86.0% |
| 4080305 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.71 | 63.0 | 5.91e-01 | 100.0% | 91.1% |
| 5061295 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.71 | 60.0 | 5.99e-01 | 95.8% | 96.0% |
| 3289257 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.71 | 59.0 | 5.68e-01 | 98.6% | 80.0% |
| 3245549 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.71 | 61.0 | 5.85e-01 | 97.2% | 82.4% |
| 4537345 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.71 | 59.0 | 5.68e-01 | 98.6% | 80.0% |
| 3173371 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 62.0 | 5.61e-01 | 100.0% | 82.0% |
| 3384982 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 63.0 | 5.54e-01 | 100.0% | 92.4% |
| 4118694 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.70 | 61.0 | 6.08e-01 | 100.0% | 94.7% |
| 4028046 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 63.0 | 5.95e-01 | 100.0% | 97.6% |
| 3514492 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 63.0 | 5.51e-01 | 98.6% | 71.4% |
| 3598239 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 63.0 | 5.84e-01 | 100.0% | 86.7% |
| 4932197 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.70 | 59.0 | 6.05e-01 | 98.6% | 98.6% |
| 3681868 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 61.0 | 5.44e-01 | 100.0% | 77.1% |
| 3620547 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 63.0 | 5.43e-01 | 100.0% | 68.2% |
| 5047006 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.70 | 58.0 | 5.10e-01 | 98.6% | 61.8% |
| 4945098 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.70 | 57.0 | 5.58e-01 | 97.2% | 83.7% |
| 3998323 | 304.9.1.58 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Nup35_RRM_2 | 0.70 | 60.0 | 5.22e-01 | 95.8% | 66.4% |
| 5041003 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.70 | 59.0 | 5.77e-01 | 95.8% | 92.3% |
| 3262267 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.70 | 61.0 | 5.90e-01 | 100.0% | 93.8% |
| 3718250 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.69 | 62.0 | 5.79e-01 | 100.0% | 85.6% |
| 3407044 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.69 | 60.0 | 5.77e-01 | 100.0% | 91.8% |
| 3249128 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.69 | 60.0 | 5.66e-01 | 100.0% | 85.6% |
| 4173219 | 304.8.1.1 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C | 0.69 | 60.0 | 5.65e-01 | 100.0% | 84.4% |
| 3260062 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.69 | 59.0 | 5.81e-01 | 98.6% | 90.0% |
| 4975141 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.69 | 59.0 | 5.84e-01 | 95.8% | 97.3% |
| 3477733 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 60.0 | 5.61e-01 | 98.6% | 85.6% |
| 3800971 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 60.0 | 5.27e-01 | 98.6% | 68.2% |
| 3270137 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.69 | 61.0 | 5.15e-01 | 98.6% | 63.3% |
| 4552457 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.69 | 59.0 | 5.58e-01 | 98.6% | 85.6% |
| 3728308 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 60.0 | 5.44e-01 | 98.6% | 83.0% |
| 3188088 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.69 | 58.0 | 5.90e-01 | 97.2% | 97.1% |
| 3220523 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.69 | 61.0 | 5.51e-01 | 100.0% | 77.0% |
| 3209679 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.68 | 59.0 | 5.46e-01 | 98.6% | 85.3% |
| 166549 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 59.0 | 5.54e-01 | 97.2% | 87.4% |
| 3349690 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 60.0 | 5.09e-01 | 100.0% | 64.2% |
| 3833971 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 58.0 | 4.19e-01 | 97.2% | 34.9% |
| 5045299 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 56.0 | 4.72e-01 | 98.6% | 52.3% |
| 3706330 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.68 | 57.0 | 4.71e-01 | 97.2% | 50.7% |
| 3645435 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 60.0 | 4.88e-01 | 98.6% | 56.3% |
| 4954778 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.68 | 57.0 | 5.54e-01 | 95.8% | 85.0% |
| 3805699 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.68 | 59.0 | 5.77e-01 | 97.2% | 88.7% |
| 3484288 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.68 | 59.0 | 5.44e-01 | 98.6% | 80.0% |
| 3273984 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.68 | 59.0 | 5.64e-01 | 100.0% | 92.9% |
| 3645251 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.68 | 60.0 | 4.99e-01 | 98.6% | 60.8% |
| 4024640 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 58.0 | 5.22e-01 | 100.0% | 75.0% |
| 5077094 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.67 | 58.0 | 5.40e-01 | 100.0% | 78.9% |
| 3415533 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.66 | 57.0 | 4.87e-01 | 98.6% | 63.3% |
| 3803779 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.66 | 54.0 | 5.35e-01 | 98.6% | 88.0% |
| 4996984 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.66 | 55.0 | 5.44e-01 | 100.0% | 89.3% |
| 4332273 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.65 | 54.0 | 5.05e-01 | 95.8% | 75.6% |
| 4140109 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.65 | 56.0 | 5.58e-01 | 100.0% | 94.7% |
| 3802873 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.65 | 53.0 | 5.29e-01 | 95.8% | 90.7% |
| 4990222 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.64 | 55.0 | 5.13e-01 | 100.0% | 77.9% |
| 5077991 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 55.0 | 5.38e-01 | 100.0% | 97.5% |
| 3968152 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.63 | 53.0 | 5.25e-01 | 98.6% | 90.7% |
| 3184318 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.63 | 52.0 | 4.98e-01 | 98.6% | 80.0% |
| 4954226 | 304.122.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 | 0.63 | 54.0 | 4.92e-01 | 100.0% | 81.0% |
| 3175177 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.61 | 50.0 | 4.98e-01 | 97.2% | 90.7% |
| 5043133 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 48.0 | 4.30e-01 | 97.2% | 60.9% |
D2
medium
residues 1-164
Domain cluster:
rep: E2_protein__YP_009408613__Sus_scrofa_papillomavirus_2__2025338__D1-195
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00508.23 best | PPV_E2_N | 34.6 | 1.70e-08 | 90.2% | 74.0% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.55 | 25.0 | 3.37e-01 | 71.3% | 81.2% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.54 | 28.0 | 3.77e-01 | 78.7% | 97.6% |
| 3us4A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 22.0 | 2.79e-01 | 84.8% | 61.9% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.52 | 25.0 | 3.56e-01 | 99.4% | 94.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2084 | 52.1.1.1 ↗ | beta sandwiches › E2 regulatory, transactivation domain › E2 regulatory, transactivation domain › E2 regulatory, transactivation domain › PPV_E2_N | 0.75 | 65.0 | 6.15e-01 | 92.7% | 83.0% |
| 3688281 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.65 | 27.0 | 3.54e-01 | 71.3% | 66.3% |
| 3976843 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.63 | 27.0 | 3.68e-01 | 86.0% | 74.2% |
| 4013477 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.61 | 27.0 | 3.29e-01 | 74.4% | 60.0% |
| 3233589 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 25.0 | 3.64e-01 | 70.7% | 92.0% |