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E3_14.7k_protein
Euk-VirCynomolgus_adenovirus_1
E3_14.7k_protein__YP_009361343__Cynomolgus_adenovirus_1__507488
Identity
- Accession:
- YP_009361343 ↗
- Protein ID:
- E3_14.7k_protein
- Kingdom:
- euk
Quality
88.6
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Cynomolgus_adenovirus_1
TaxID: 507488
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-122
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03307.21 best | Adeno_E3_15_3 | 155.5 | 7.80e-46 | 91.6% | 94.9% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 35.0 | 3.82e-01 | 80.7% | 50.5% |
| 3n40P04 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.58 | 28.0 | 3.41e-01 | 80.7% | 71.2% |
| 3muuB02 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.56 | 27.0 | 3.32e-01 | 78.2% | 69.9% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.56 | 40.0 | 4.26e-01 | 79.8% | 85.3% |
| 3v6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 28.0 | 3.24e-01 | 84.0% | 63.2% |
| 1ewfA02 | 3.15.20.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 | 0.55 | 42.0 | 3.24e-01 | 80.7% | 65.9% |
| 6brbD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 27.0 | 3.09e-01 | 73.1% | 63.2% |
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.53 | 40.0 | 3.01e-01 | 79.8% | 61.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508271 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.59 | 45.0 | 4.13e-01 | 79.8% | 76.1% |
| 3843777 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.56 | 44.0 | 3.48e-01 | 84.0% | 72.2% |
| 3506845 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.55 | 41.0 | 3.26e-01 | 77.3% | 73.2% |
| 4990601 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 27.0 | 3.17e-01 | 79.8% | 69.3% |
| 4003909 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.53 | 40.0 | 3.56e-01 | 79.0% | 82.9% |
| 3366806 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.53 | 39.0 | 3.13e-01 | 77.3% | 70.6% |
| 3932156 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.53 | 28.0 | 3.55e-01 | 72.3% | 90.8% |
| 3847303 | 5084.5.1.67 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Hobbit | 0.51 | 37.0 | 3.21e-01 | 75.6% | 57.4% |