E3_ligase

Euk-Vir

White_spot_syndrome_virus

E3_ligase__YP_009220549__White_spot_syndrome_virus__342409

Identity

44.7 mean pLDDT

Naldaviricetes› Nimaviridae› Whispovirus› White_spot_syndrome_virus

TaxID: 342409

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-147

PDB

D2 medium residues 148-265

PDB

D3 medium residues 266-371

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yc5A02	3.30.1600.10	Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain'	0.61	32.0	3.58e-01	75.5%	64.3%
3i2dA02	3.30.40.10	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger)	0.56	43.0	4.08e-01	80.2%	75.0%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3743231	376.1.1.21 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2	0.73	46.0	5.36e-01	77.4%	89.3%
3452159	376.1.1.21 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2	0.69	49.0	5.49e-01	74.5%	91.8%
4013968	376.1.1.0 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box	0.69	50.0	5.13e-01	74.5%	86.0%
3899147	376.1.1.22 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3	0.68	44.0	5.21e-01	70.8%	98.6%
3306931	376.1.1.21 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2	0.65	49.0	4.72e-01	81.1%	69.2%
3507852	376.1.1.6 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ	0.57	44.0	4.08e-01	80.2%	76.9%
3489694	377.1.1.12 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2	0.55	37.0	3.45e-01	98.1%	55.4%