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E4.1
Euk-VirLizard_adenovirus_2
E4.1__YP_009051674__Lizard_adenovirus_2__874272
Identity
- Accession:
- YP_009051674 ↗
- Protein ID:
- E4.1
- Kingdom:
- euk
Quality
75.2
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Lizard_adenovirus_2
TaxID: 874272
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-137
Domain cluster:
rep: E4.1__NP_077407__Bovine_atadenovirus_D__130499__D6-125
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nz8A00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.60 | 42.0 | 4.30e-01 | 71.2% | 98.3% |
| 4kgmA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.60 | 46.0 | 3.78e-01 | 80.8% | 82.2% |
| 4mt1A02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.60 | 43.0 | 4.75e-01 | 75.2% | 99.0% |
| 2gmlA01 | 3.30.70.580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, N-terminal subdomain | 0.57 | 35.0 | 3.86e-01 | 96.0% | 75.0% |
| 1zr6A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.57 | 43.0 | 3.66e-01 | 79.2% | 66.5% |
| 1gmnA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.53 | 33.0 | 3.84e-01 | 85.6% | 87.5% |
| 1i8nA00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.52 | 31.0 | 3.63e-01 | 88.0% | 83.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4511949 | 304.48.1.74 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Phage_GPA | 0.68 | 56.0 | 4.50e-01 | 88.0% | 87.5% |
| 3947798 | 304.8.1.70 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Phage_GPA | 0.66 | 53.0 | 4.15e-01 | 88.0% | 77.1% |
| 3997418 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.63 | 44.0 | 3.22e-01 | 72.0% | 57.0% |
| 3968511 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.60 | 43.0 | 3.87e-01 | 74.4% | 91.4% |
| 3607428 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 42.0 | 4.44e-01 | 72.0% | 89.1% |
| 3939178 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.58 | 41.0 | 3.64e-01 | 72.8% | 87.0% |
| 5000353 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.56 | 43.0 | 4.30e-01 | 83.2% | 96.2% |
| 3888455 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.54 | 34.0 | 3.95e-01 | 85.6% | 86.7% |
| 3516159 | 109.4.1.88 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MUN | 0.54 | 30.0 | 1.87e-01 | 98.4% | 9.2% |
| 3630367 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 33.0 | 3.94e-01 | 87.2% | 91.8% |
| 3214931 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.53 | 32.0 | 3.80e-01 | 85.6% | 88.2% |
| 3620035 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.51 | 31.0 | 3.71e-01 | 85.6% | 89.4% |
| 3217661 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.51 | 31.0 | 3.70e-01 | 87.2% | 90.6% |