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E4_control_protein

Euk-Vir

Psittacine_aviadenovirus_B

E4_control_protein__YP_009508596__Psittacine_aviadenovirus_B__2169709

Identity

Accession:
YP_009508596 ↗
Protein ID:
E4_control_protein
Kingdom:
euk

Quality

68.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-123
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.65 49.0 3.70e-01 95.1% 35.2%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.64 47.0 4.40e-01 100.0% 61.2%
2raqA01 3.30.70.1340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain 0.63 40.0 4.31e-01 91.3% 75.3%
5wpjA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.62 51.0 5.02e-01 100.0% 85.2%
7dluA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 44.0 4.83e-01 98.1% 98.7%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 41.0 4.46e-01 94.2% 84.3%
4i6yA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.60 50.0 4.94e-01 100.0% 85.5%
1coyA02 3.30.410.10 Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › Cholesterol Oxidase; domain 2 0.59 43.0 3.87e-01 98.1% 52.3%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 51.0 4.13e-01 100.0% 78.9%
2b1xA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.57 50.0 3.61e-01 100.0% 59.4%
2bmoA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.57 50.0 3.63e-01 100.0% 59.7%
3nqnA00 3.30.530.70 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 0.56 48.0 4.34e-01 99.0% 97.4%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.56 48.0 3.79e-01 94.2% 82.6%
3gcfA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.56 49.0 3.74e-01 100.0% 68.5%
2qrdA00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.56 48.0 4.65e-01 96.1% 97.4%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.56 44.0 4.34e-01 99.0% 82.4%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.55 36.0 3.46e-01 84.5% 55.2%
1xmbA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 42.0 4.23e-01 100.0% 83.2%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 47.0 4.28e-01 99.0% 97.9%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 47.0 4.19e-01 100.0% 95.4%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.54 44.0 4.51e-01 100.0% 94.0%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 47.0 4.26e-01 100.0% 97.9%
4iedA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 39.0 2.98e-01 75.7% 86.4%
1fm4A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 47.0 4.14e-01 100.0% 93.1%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 47.0 4.15e-01 100.0% 96.8%
1uliA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 47.0 3.43e-01 100.0% 57.9%
3gkeA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 47.0 3.78e-01 100.0% 88.1%
4xrtA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 46.0 4.20e-01 100.0% 100.0%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 46.0 3.69e-01 100.0% 77.0%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 4.01e-01 100.0% 93.1%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.52 46.0 3.84e-01 100.0% 79.3%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 4.14e-01 98.1% 93.5%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 3.90e-01 99.0% 85.0%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 4.02e-01 98.1% 90.7%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 4.05e-01 98.1% 95.7%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.51 41.0 3.88e-01 97.1% 72.2%
6nhsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 38.0 2.87e-01 77.7% 99.6%
3ostA00 3.30.310.220 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Fungal kinase associated-1 domain 0.51 45.0 4.32e-01 99.0% 85.7%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 36.0 2.86e-01 75.7% 88.3%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 39.0 3.08e-01 83.5% 81.8%
2lf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 3.55e-01 91.3% 78.9%
7prrB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 36.0 3.11e-01 74.8% 100.0%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 37.0 3.34e-01 76.7% 58.5%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 43.0 4.06e-01 99.0% 96.2%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.50 43.0 4.09e-01 97.1% 89.6%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 43.0 4.06e-01 100.0% 100.0%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.50 39.0 3.84e-01 99.0% 76.5%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5010022 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.68 51.0 5.58e-01 99.0% 96.5%
4944179 304.43.1.0 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 0.63 50.0 5.08e-01 99.0% 88.0%
5058271 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.62 46.0 4.69e-01 100.0% 82.0%
3344942 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.62 47.0 4.36e-01 99.0% 63.0%
3340180 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.61 48.0 4.86e-01 100.0% 87.0%
4967398 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.61 46.0 4.73e-01 100.0% 83.0%
5081155 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.61 45.0 4.80e-01 99.0% 91.1%
3545474 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 44.0 4.62e-01 98.1% 86.7%
3526482 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.60 48.0 4.80e-01 98.1% 84.8%
5060761 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.59 46.0 4.57e-01 99.0% 81.9%
3343085 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.57 50.0 4.41e-01 100.0% 95.6%
4930862 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.57 47.0 4.54e-01 99.0% 79.2%
5038503 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.57 50.0 4.62e-01 100.0% 99.3%
3970024 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 41.0 3.45e-01 75.7% 73.7%
3702257 304.49.1.0 a+b two layers › Alpha-beta plaits › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD, N-terminal domain/Dystroglycan, domain 2 0.56 49.0 4.72e-01 100.0% 84.2%
3717360 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.56 49.0 4.73e-01 100.0% 84.2%
3987502 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.56 47.0 4.05e-01 95.1% 93.1%
3965583 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.56 48.0 4.42e-01 98.1% 97.9%
1622846 331.3.1.13 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Aromatic_hydrox 0.56 49.0 3.83e-01 100.0% 73.7%
3589487 223.1.1.4 a+b three layers › Profilin-like › sensor domains › sensor domains › IclR 0.55 42.0 3.53e-01 79.6% 99.4%
3426443 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.55 42.0 4.03e-01 92.2% 70.0%
4928245 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.55 48.0 4.44e-01 100.0% 98.6%
3291118 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 47.0 4.25e-01 99.0% 94.7%
4117472 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 48.0 4.22e-01 100.0% 87.5%
3278294 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.54 47.0 4.56e-01 100.0% 97.5%
984477 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.54 45.0 4.63e-01 100.0% 96.0%
6321 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.53 46.0 4.24e-01 99.0% 97.9%
3953711 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.53 47.0 4.22e-01 100.0% 99.3%
4964134 304.39.1.1 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd 0.53 45.0 4.32e-01 100.0% 80.8%
3959863 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.53 47.0 4.22e-01 100.0% 99.3%
3278927 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.53 46.0 4.35e-01 100.0% 100.0%
1715835 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.53 46.0 4.20e-01 100.0% 100.0%
3288058 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.52 45.0 4.14e-01 100.0% 93.1%
5044347 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.52 38.0 3.75e-01 75.7% 93.6%
3969452 304.6.1.0 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain 0.52 40.0 3.06e-01 100.0% 32.5%
3642585 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.52 44.0 4.11e-01 94.2% 79.2%
4999273 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.52 37.0 2.30e-01 75.7% 16.5%
4959697 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.52 37.0 2.86e-01 75.7% 43.8%
4993408 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.51 45.0 3.98e-01 100.0% 86.3%
5073891 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.51 44.0 4.51e-01 98.1% 100.0%
5018490 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.51 37.0 3.49e-01 75.7% 84.8%
3663084 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.51 44.0 3.97e-01 97.1% 84.1%
3618860 223.1.1.29 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.51 37.0 3.33e-01 74.8% 78.6%
143846 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.51 42.0 3.61e-01 91.3% 82.6%
4456367 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.51 45.0 4.25e-01 100.0% 83.2%
3787490 331.3.1.2 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.51 44.0 3.43e-01 100.0% 66.1%
4294933 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.51 36.0 3.11e-01 75.7% 62.4%
3953847 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.50 43.0 3.86e-01 100.0% 93.7%
3690532 331.3.1.2 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.50 44.0 3.56e-01 100.0% 63.8%
D2 medium residues 130-212
PDB