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E6

Euk-Vir

Felis_domesticus_papillomavirus_2

E6__YP_009507279__Felis_domesticus_papillomavirus_2__568209

Identity

Accession:: YP_009507279 ↗
Protein ID:: E6
Kingdom:: euk

Quality

93.0 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Dyothetapapillomavirus› Felis_domesticus_papillomavirus_2

TaxID: 568209

Cluster

View cluster (138 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-63

PDB

Domain cluster: rep: putative_E6_protein__YP_008574810__Felis_catus_papillomavirus_4__1398507__D7-59

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00518.23 best	E6	33.1	9.00e-08	68.4%	34.5%

D2 high residues 69-129

PDB

Domain cluster: rep: E6__YP_009177725__Trichechus_manatus_latirostris_papillomavirus_4__2848317__D98-164

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00518.23 best	E6	29.1	1.60e-06	100.0%	41.8%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2m3lA00	3.30.240.40	Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein	0.80	69.0	6.39e-01	93.4%	75.0%
2ljxA00	3.30.240.40	Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein	0.69	58.0	5.27e-01	93.4%	72.0%
2juoA00	3.10.20.90	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	0.56	46.0	4.12e-01	93.4%	86.5%
1y8fA00	3.30.60.20	Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 ›	0.54	34.0	3.62e-01	96.7%	78.4%
1iq8A03	3.10.450.90	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain	0.51	34.0	3.24e-01	70.5%	81.1%
5xgbA03	3.20.20.450	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain	0.50	36.0	2.48e-01	77.0%	38.2%
3g79A02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.50	34.0	2.33e-01	70.5%	45.8%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4802727	4255.1.1.1 ↗	few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › E6	0.89	84.0	7.93e-01	100.0%	87.1%
1734555	4255.1.1.1 ↗	few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › E6	0.87	80.0	7.23e-01	100.0%	75.3%
185478	4255.1.1.1 ↗	few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › E6	0.77	66.0	6.53e-01	96.7%	87.7%
4802726	4255.1.1.1 ↗	few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › E6	0.72	59.0	5.81e-01	88.5%	84.4%
185477	4255.1.1.1 ↗	few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › E6	0.69	53.0	5.15e-01	96.7%	74.6%
3036062	4255.1.1.1 ↗	few secondary structure elements › E6 C-terminal domain-like › E6 C-terminal domain-like › E6 C-terminal domain-like › E6	0.66	57.0	5.36e-01	96.7%	77.6%
2856857	213.1.1.72 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1, Acetyltransf_10	0.58	40.0	2.97e-01	73.8%	50.3%
4015384	213.1.1.1 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1	0.55	44.0	3.19e-01	93.4%	40.9%
3281871	101.1.9.17 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1	0.51	33.0	2.73e-01	100.0%	34.2%
5044669	213.1.1.1 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1	0.51	42.0	3.17e-01	96.7%	35.9%
3522626	219.1.1.15 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU	0.51	38.0	2.82e-01	85.2%	38.9%