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E7

Euk-Vir

Camelus_dromedarius_papillomavirus_2

E7__YP_004306473__Camelus_dromedarius_papillomavirus_2__996651

Identity

Accession:
YP_004306473 ↗
Protein ID:
E7
Kingdom:
euk

Quality

67.3 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Deltapapillomavirus› Camelus_dromedarius_papillomavirus_2

TaxID: 996651

Cluster

View cluster (135 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 64-117
PDB
Domain cluster: rep: transforming_protein_E7__NP_041326__Human_papillomavirus_type_16__333760__D50-96
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00527.24 best E7 39.9 5.50e-10 81.5% 46.7%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ewlA00 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.92 76.0 7.55e-01 88.9% 85.7%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.75 52.0 4.34e-01 72.2% 75.6%
1j5yA02 3.30.1340.20 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain 0.70 48.0 3.88e-01 72.2% 94.4%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.70 47.0 3.34e-01 70.4% 40.7%
3buxB03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 44.0 3.81e-01 70.4% 40.7%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.64 49.0 4.01e-01 87.0% 70.1%
2hvzA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 44.0 4.05e-01 72.2% 93.1%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.62 43.0 3.84e-01 72.2% 63.2%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 41.0 3.52e-01 70.4% 43.5%
3p2aA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.60 36.0 4.12e-01 87.0% 88.9%
4me3A03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.60 43.0 4.28e-01 90.7% 74.5%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.60 40.0 3.39e-01 70.4% 44.7%
1neiA00 3.30.160.220 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG 0.57 47.0 4.60e-01 96.3% 88.3%
4lmyA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.56 43.0 4.39e-01 88.9% 98.1%
2z86D02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 39.0 2.61e-01 77.8% 88.8%
1wmhA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 35.0 3.15e-01 74.1% 41.0%
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.55 46.0 2.71e-01 96.3% 56.4%
2pw9C02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 35.0 3.46e-01 74.1% 60.3%
5ffiE00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.54 35.0 2.91e-01 72.2% 35.3%
5sviB00 3.30.40.100 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.53 38.0 3.90e-01 81.5% 79.2%
4mtdA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.53 42.0 4.07e-01 92.6% 88.9%
2gffA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 35.0 3.02e-01 70.4% 77.1%
7pyvC02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 36.0 3.34e-01 74.1% 100.0%
1v6eA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 35.0 3.19e-01 74.1% 100.0%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.51 38.0 3.33e-01 87.0% 100.0%
2fe3A02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.51 40.0 3.96e-01 90.7% 96.5%
2ckaA01 3.40.5.120 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.50 33.0 3.37e-01 72.2% 71.4%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.50 32.0 3.34e-01 72.2% 68.6%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
8138 4123.1.1.1 ↗ few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 0.96 81.0 8.33e-01 88.9% 92.3%
8137 4123.1.1.1 ↗ few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 0.92 76.0 7.77e-01 88.9% 92.3%
3969006 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.73 46.0 4.97e-01 72.2% 77.8%
4928795 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 44.0 4.77e-01 88.9% 80.0%
3935205 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.67 48.0 3.71e-01 72.2% 32.5%
4463006 3115.2.1.0 ↗ a+b two layers › GP2-like › GP2 › GP2 0.66 43.0 4.59e-01 72.2% 80.0%
3238459 616.1.1.0 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.63 40.0 3.80e-01 70.4% 52.3%
4991835 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 46.0 4.79e-01 88.9% 88.0%
3739283 3322.1.1.1 ↗ alpha bundles › N-terminal domain in fatty acid synthase subunit beta › N-terminal domain in fatty acid synthase subunit beta › N-terminal domain in fatty acid synthase subunit beta › FAS_N 0.62 52.0 3.97e-01 96.3% 87.7%
2793102 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 36.0 4.22e-01 87.0% 94.1%
3360654 376.1.3.57 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_ULT1 0.59 44.0 4.47e-01 85.2% 92.7%
3258276 4081.1.1.2 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.59 40.0 2.62e-01 70.4% 53.8%
4797400 220.3.1.5 ↗ beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop_FD, PH_Rhabdo_glycop 0.56 32.0 3.41e-01 85.2% 64.6%
3371234 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.56 39.0 2.83e-01 74.1% 47.5%
3369564 130.1.1.39 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › DUF7086 0.55 44.0 3.33e-01 90.7% 43.6%
3781912 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.54 37.0 3.44e-01 74.1% 98.6%
4929843 4123.1.1.0 ↗ few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like 0.53 39.0 4.01e-01 81.5% 88.0%
4060154 4974.1.1.0 ↗ alpha bundles › CRISPR-Cas system first helical domain › CRISPR-Cas system first helical domain › CRISPR-Cas system RNase C2c2 first helical domain 0.53 44.0 3.15e-01 100.0% 55.3%
4929347 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 39.0 3.93e-01 88.9% 83.6%
3918540 386.1.1.281 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27082 0.53 33.0 3.64e-01 81.5% 87.5%
5074262 2484.1.1.22 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 0.52 39.0 2.81e-01 90.7% 25.6%
3271498 304.121.1.1 ↗ a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like › DUF1697 0.52 36.0 3.15e-01 74.1% 75.6%
4472395 7512.1.1.6 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.52 41.0 2.67e-01 90.7% 88.4%
3897370 3346.1.1.5 ↗ a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › ODR4-like 0.51 41.0 2.93e-01 100.0% 71.7%
4085524 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 31.0 3.43e-01 87.0% 91.4%
3649276 887.1.1.0 ↗ a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e 0.51 35.0 2.88e-01 77.8% 96.7%