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E7_protein

Euk-Vir

Bos_taurus_papillomavirus_12

E7_protein__YP_009175021__Bos_taurus_papillomavirus_12__1070324

Identity

Accession:
YP_009175021 ↗
Protein ID:
E7_protein
Kingdom:
euk

Quality

82.5 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Papovaviricetes› Zurhausenvirales› Papillomaviridae› Xipapillomavirus› Bos_taurus_papillomavirus_12

TaxID: 1070324

Cluster

View cluster (135 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-88
PDB
Domain cluster: rep: E7_protein__YP_009507312__Human_papillomavirus_204__1650736__D45-90
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00527.24 best E7 46.8 3.70e-12 84.3% 46.7%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ewlA00 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.92 78.0 7.56e-01 92.2% 83.9%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.70 48.0 3.37e-01 72.5% 40.1%
2jl8102 3.30.160.850 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 42.0 4.45e-01 76.5% 75.6%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 44.0 3.74e-01 72.5% 70.6%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.63 41.0 3.57e-01 70.6% 42.2%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.62 42.0 3.50e-01 72.5% 39.1%
3p2aA01 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.61 37.0 4.24e-01 92.2% 88.9%
3s8sA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.60 42.0 3.41e-01 76.5% 64.5%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.60 41.0 3.42e-01 72.5% 42.6%
5u3fB01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.59 43.0 3.18e-01 78.4% 42.9%
2gupA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 40.0 3.27e-01 70.6% 40.2%
4lmyA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.58 46.0 4.60e-01 92.2% 96.3%
2kgfA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.58 39.0 2.94e-01 70.6% 47.1%
2xauA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 41.0 2.82e-01 74.5% 77.0%
2uvaG01 1.20.1050.120 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 47.0 3.63e-01 100.0% 82.4%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.56 42.0 3.57e-01 86.3% 96.8%
6eudA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 37.0 2.66e-01 70.6% 73.5%
4mtdA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.55 45.0 4.31e-01 98.0% 88.9%
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.55 46.0 2.70e-01 98.0% 58.7%
2dafA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 38.0 3.42e-01 76.5% 96.1%
5ffiE00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.54 36.0 2.96e-01 76.5% 35.3%
3w1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 36.0 2.92e-01 70.6% 54.8%
6zwwC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 38.0 2.73e-01 78.4% 74.0%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.53 37.0 3.28e-01 76.5% 48.1%
1wmhA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 36.0 3.07e-01 70.6% 90.4%
2fe3A02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.53 43.0 4.21e-01 98.0% 96.5%
5sviB00 3.30.40.100 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.52 39.0 3.93e-01 84.3% 79.2%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.52 36.0 3.24e-01 76.5% 73.8%
2pe4A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 44.0 2.66e-01 100.0% 79.6%
2m1mA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 35.0 2.79e-01 70.6% 34.6%
2xigA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.51 41.0 4.04e-01 96.1% 96.4%
2dzmA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 32.0 2.94e-01 76.5% 44.4%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
8138 4123.1.1.1 ↗ few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 0.95 82.0 8.21e-01 92.2% 90.4%
8137 4123.1.1.1 ↗ few secondary structure elements › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 C-terminal domain-like › E7 0.92 78.0 7.78e-01 92.2% 90.4%
3969006 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.71 46.0 4.84e-01 74.5% 75.6%
3935205 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.69 51.0 3.85e-01 74.5% 31.7%
4928795 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 43.0 4.52e-01 92.2% 77.8%
147620 4232.1.1.1 ↗ few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 0.63 46.0 3.77e-01 86.3% 42.3%
4991835 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 47.0 4.81e-01 88.2% 86.0%
4937773 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.62 43.0 4.18e-01 74.5% 81.0%
3388225 857.1.1.0 ↗ a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like 0.60 47.0 4.32e-01 86.3% 66.2%
5010744 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.59 46.0 4.36e-01 92.2% 76.9%
3360654 376.1.3.57 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_ULT1 0.58 45.0 4.44e-01 88.2% 90.9%
3285877 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 36.0 2.37e-01 76.5% 14.2%
3708825 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 37.0 3.94e-01 76.5% 75.6%
4061421 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 37.0 3.24e-01 76.5% 42.5%
4422146 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.56 38.0 2.62e-01 72.5% 50.2%
4085524 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 34.0 3.73e-01 92.2% 91.4%
3679515 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.53 36.0 3.72e-01 74.5% 86.7%
3588171 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.53 40.0 3.04e-01 90.2% 37.2%
3737908 221.1.1.94 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › AIP3 0.52 35.0 3.06e-01 70.6% 46.3%
3317451 375.10.1.3 ↗ few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf_DPOE_2 0.51 36.0 3.38e-01 92.2% 60.0%