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EF057797.1__ABM73420.1__X__00056

Bact-Vir

EF057797.1__ABM73420.1__X__00056

Identity

Accession:
EF057797 ↗
Kingdom:
phage

Quality

89.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-123
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08448.17 best PAS_4 53.5 3.60e-14 89.1% 92.7%
CATH (73)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6kjuB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.94 84.0 8.51e-01 91.6% 94.9%
6zj8D01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.86 68.0 7.01e-01 97.5% 86.0%
2jheA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.84 65.0 6.82e-01 93.3% 88.0%
5hwtB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.82 68.0 6.79e-01 86.6% 87.7%
4i5sA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.82 63.0 6.95e-01 87.4% 98.0%
3fg8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.81 64.0 6.76e-01 92.4% 92.5%
3mxqC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.81 67.0 6.57e-01 86.6% 82.4%
3luqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.81 72.0 7.34e-01 95.8% 98.2%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.80 65.0 6.71e-01 85.7% 90.2%
1f98A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.80 70.0 6.94e-01 95.8% 88.8%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.79 65.0 6.07e-01 100.0% 70.5%
2zbbA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.79 53.0 6.32e-01 85.7% 100.0%
3mfxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.77 68.0 7.00e-01 98.3% 99.1%
2b02A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.77 62.0 6.64e-01 85.7% 99.0%
3k3dA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.77 70.0 6.93e-01 99.2% 92.1%
3b33A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.77 65.0 6.81e-01 93.3% 98.2%
3volA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 70.0 6.63e-01 97.5% 84.8%
2r78C00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 66.0 6.76e-01 96.6% 94.8%
3mjqA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 63.0 6.63e-01 91.6% 98.1%
4hh2C04 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 66.0 6.65e-01 94.1% 94.0%
3ewkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 60.0 6.43e-01 84.0% 96.1%
3nhqA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.76 57.0 5.78e-01 93.3% 79.0%
2gj3A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 67.0 6.75e-01 96.6% 95.0%
3bwlB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 64.0 6.41e-01 94.1% 88.6%
3lyxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 67.0 6.76e-01 96.6% 95.8%
2kdkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 61.0 6.32e-01 85.7% 94.5%
3eehA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 61.0 6.20e-01 86.6% 89.7%
3pxpA02 3.30.450.180 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.75 68.0 5.67e-01 98.3% 84.4%
4k08A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.75 64.0 5.99e-01 100.0% 75.7%
5xgbA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 65.0 6.59e-01 96.6% 94.1%
2z6cA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 60.0 6.02e-01 85.7% 86.0%
1p97A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 60.0 6.15e-01 85.7% 89.5%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 67.0 6.73e-01 97.5% 98.3%
1bywA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 60.0 6.26e-01 85.7% 96.4%
2pd8B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 65.0 6.13e-01 94.1% 100.0%
4jgpA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 59.0 6.39e-01 98.3% 100.0%
4f3lA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.74 59.0 5.94e-01 85.7% 83.6%
3oloA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 63.0 6.50e-01 99.2% 98.2%
3ewkA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 59.0 6.20e-01 85.7% 99.1%
1d06A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 64.0 6.26e-01 95.8% 88.5%
4hoiB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 61.0 6.23e-01 89.1% 93.9%
3h9wA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 58.0 6.07e-01 85.7% 94.5%
4ehoA04 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 65.0 6.49e-01 100.0% 94.4%
4exoA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.72 61.0 5.68e-01 100.0% 74.0%
3mqqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 61.0 6.20e-01 93.3% 93.2%
5ereA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 59.0 5.80e-01 99.2% 81.2%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 62.0 5.91e-01 94.1% 83.3%
2ykfA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 63.0 5.82e-01 94.1% 92.5%
1p0zA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 57.0 5.55e-01 100.0% 77.1%
4m4xA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.71 62.0 6.08e-01 94.1% 99.2%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.70 57.0 5.52e-01 99.2% 76.7%
3lifB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.70 58.0 5.47e-01 99.2% 72.9%
3gdiA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 58.0 6.01e-01 99.2% 98.2%
2qkpD00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 60.0 5.82e-01 96.6% 89.6%
1zhhB01 3.30.450.220 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › LuxQ periplasmic domain, N-terminal subdomain 0.67 58.0 5.24e-01 99.2% 69.4%
3caxA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 59.0 5.62e-01 96.6% 82.6%
3mr0A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 56.0 5.86e-01 93.3% 100.0%
4lrzE01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.66 61.0 5.26e-01 100.0% 68.5%
1oj5A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 53.0 5.63e-01 86.6% 97.1%
7prrB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 59.0 5.25e-01 99.2% 88.8%
4dj3B01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.65 56.0 5.77e-01 99.2% 99.1%
5y6iA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.64 57.0 5.16e-01 98.3% 86.3%
1ysqA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.63 58.0 5.01e-01 100.0% 80.7%
3mq0B02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.63 58.0 5.08e-01 100.0% 82.0%
3licA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.62 57.0 4.94e-01 100.0% 68.5%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.61 54.0 3.99e-01 97.5% 95.7%
5tjjB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.60 55.0 4.81e-01 100.0% 85.4%
3vskA03 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.60 54.0 3.87e-01 100.0% 94.4%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.57 33.0 3.37e-01 86.6% 58.3%
4jf6A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 47.0 3.81e-01 94.1% 90.4%
2p3hA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.54 42.0 4.53e-01 94.1% 100.0%
1m6kA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 45.0 3.55e-01 95.0% 89.6%
1sr4B00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.51 44.0 3.53e-01 100.0% 93.0%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971053 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.89 75.0 7.85e-01 88.2% 95.5%
4969129 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.89 75.0 7.96e-01 87.4% 99.0%
5019134 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.87 76.0 6.93e-01 92.4% 72.7%
4951558 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.85 70.0 7.17e-01 87.4% 88.7%
4973550 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.85 75.0 7.49e-01 93.3% 91.7%
5051876 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.84 77.0 7.56e-01 96.6% 91.2%
3968543 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.84 76.0 6.96e-01 95.8% 76.0%
4958145 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.84 77.0 5.84e-01 96.6% 45.1%
4951183 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.84 69.0 7.03e-01 86.6% 88.7%
5034773 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.83 71.0 7.35e-01 91.6% 96.4%
5075671 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.83 78.0 5.93e-01 99.2% 48.0%
4931714 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.83 69.0 7.34e-01 87.4% 99.0%
4999273 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.83 77.0 4.73e-01 100.0% 77.8%
4952182 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.83 70.0 7.29e-01 91.6% 96.4%
4959467 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.82 75.0 6.83e-01 97.5% 75.2%
4950605 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.82 73.0 7.22e-01 96.6% 88.8%
4943531 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 69.0 6.93e-01 88.2% 90.8%
4944872 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.82 75.0 7.03e-01 96.6% 82.9%
2724284 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.81 71.0 6.72e-01 95.8% 79.7%
4203309 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.81 71.0 4.72e-01 93.3% 26.2%
5050351 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.81 67.0 7.12e-01 86.6% 98.1%
4682251 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.81 72.0 4.78e-01 94.1% 27.9%
4930366 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.81 72.0 7.41e-01 96.6% 98.3%
4939729 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.80 71.0 6.98e-01 94.1% 88.8%
5034550 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.80 66.0 6.71e-01 86.6% 88.7%
4980708 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.80 72.0 6.76e-01 96.6% 81.4%
4962862 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.80 71.0 7.00e-01 94.1% 89.6%
5049432 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.80 72.0 5.03e-01 95.8% 32.7%
3973000 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.80 65.0 5.52e-01 86.6% 54.7%
3972571 223.1.1.111 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS, PAS_9 0.80 70.0 5.25e-01 93.3% 41.1%
5005721 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.79 70.0 7.10e-01 93.3% 97.4%
4973551 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.79 72.0 7.12e-01 97.5% 93.6%
4329048 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.79 74.0 6.97e-01 100.0% 90.0%
5075672 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.79 70.0 5.48e-01 100.0% 47.7%
4005601 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.79 67.0 6.62e-01 89.9% 85.6%
4975334 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.79 72.0 6.72e-01 98.3% 80.7%
3290405 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.79 71.0 6.91e-01 96.6% 89.2%
4988999 605.1.1.352 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PAS 0.79 73.0 5.76e-01 99.2% 52.2%
4944434 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.79 70.0 7.16e-01 96.6% 99.1%
4977960 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.79 71.0 4.36e-01 96.6% 17.8%
5049435 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.78 70.0 7.16e-01 96.6% 99.1%
5052455 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.78 69.0 6.82e-01 94.1% 89.6%
5044926 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.78 65.0 6.84e-01 87.4% 99.0%
5002348 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.78 71.0 5.23e-01 96.6% 41.1%
3971676 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.78 65.0 6.55e-01 89.1% 87.5%
4968254 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.78 69.0 6.93e-01 94.1% 93.3%
4969128 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.78 72.0 6.69e-01 100.0% 81.4%
4931355 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.78 64.0 6.69e-01 88.2% 93.6%
4950576 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.78 70.0 6.55e-01 96.6% 82.1%
4017509 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.78 69.0 6.48e-01 94.1% 80.7%
4061009 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.78 66.0 6.10e-01 91.6% 72.0%
4980079 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.78 70.0 6.61e-01 96.6% 82.1%
5052073 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.77 68.0 4.88e-01 93.3% 35.9%
4977587 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 62.0 6.28e-01 85.7% 85.0%
4952183 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.77 63.0 6.69e-01 86.6% 98.1%
4960098 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.77 69.0 6.92e-01 96.6% 95.0%
3972990 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 68.0 6.83e-01 94.1% 95.0%
4977584 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 62.0 6.26e-01 85.7% 85.0%
5062841 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.77 69.0 6.65e-01 96.6% 86.7%
4102446 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.77 69.0 5.69e-01 96.6% 56.6%
4945537 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 64.0 6.45e-01 89.1% 89.2%
5083330 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 69.0 4.28e-01 96.6% 74.2%
5004858 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.77 69.0 6.32e-01 96.6% 79.3%
4980668 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.76 65.0 4.79e-01 91.6% 36.7%
4951548 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.76 69.0 5.10e-01 96.6% 41.1%
4960088 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.76 68.0 6.85e-01 95.8% 95.0%
3386050 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.76 63.0 6.46e-01 89.1% 91.3%
4980669 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.76 68.0 6.62e-01 99.2% 88.5%
5050353 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.76 66.0 6.29e-01 93.3% 81.5%
4959689 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.76 62.0 6.55e-01 86.6% 98.1%
4945191 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.76 67.0 6.61e-01 96.6% 90.4%
5039825 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.76 65.0 6.40e-01 91.6% 88.0%
5004042 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.75 68.0 6.54e-01 96.6% 86.7%
3284786 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.75 68.0 6.22e-01 96.6% 78.0%
3973927 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.75 67.0 6.60e-01 96.6% 92.8%
5080413 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.75 67.0 6.18e-01 96.6% 78.0%
5047294 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.74 64.0 6.53e-01 94.1% 95.7%
4996571 223.1.1.27 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_10 0.74 67.0 6.39e-01 96.6% 89.6%
4959106 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.74 64.0 4.81e-01 93.3% 39.6%
4986903 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.74 61.0 6.10e-01 87.4% 86.7%
4958221 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.74 67.0 4.99e-01 96.6% 41.5%
4999616 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.74 65.0 4.45e-01 94.1% 28.6%
4958865 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.74 62.0 6.06e-01 89.9% 82.3%
5033693 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.74 64.0 6.18e-01 93.3% 85.9%
3963339 223.1.1.24 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 0.74 64.0 6.44e-01 96.6% 92.5%
4008773 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.74 61.0 6.43e-01 88.2% 99.0%
4999863 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.74 66.0 4.70e-01 96.6% 34.9%
5045590 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.73 64.0 6.15e-01 94.1% 83.7%
3780897 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.73 67.0 5.17e-01 98.3% 47.6%
4980700 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.73 64.0 6.31e-01 94.1% 90.4%
4960084 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.73 65.0 4.92e-01 96.6% 41.8%
4137378 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.73 59.0 5.85e-01 85.7% 81.6%
3977610 223.1.1.177 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3, PAS_4, PAS_8 0.73 65.0 4.90e-01 96.6% 41.8%
3386035 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.73 64.0 6.19e-01 95.8% 85.2%
4960083 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.72 63.0 6.41e-01 93.3% 97.4%
4998983 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 65.0 4.06e-01 99.2% 74.7%
3970094 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 64.0 5.91e-01 96.6% 76.7%
3982478 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.71 62.0 5.93e-01 93.3% 82.2%
4996179 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.70 65.0 4.24e-01 100.0% 56.5%
5046056 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.70 62.0 5.94e-01 96.6% 88.1%
D2 high residues 131-234
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00196.26 best GerE 43.7 2.30e-11 54.8% 98.2%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 54.0 6.62e-01 76.9% 100.0%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 57.0 6.77e-01 70.2% 100.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.83 58.0 4.48e-01 71.2% 64.6%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 39.0 5.19e-01 73.1% 92.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.54e-01 71.2% 93.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.74 52.0 4.83e-01 73.1% 67.9%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.31e-01 78.8% 78.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.17e-01 74.0% 77.9%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.62e-01 81.7% 84.7%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 32.0 3.87e-01 73.1% 80.9%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 33.0 3.58e-01 75.0% 66.7%
1uzcA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.58 27.0 3.23e-01 88.5% 65.2%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 31.0 3.84e-01 73.1% 83.3%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 32.0 3.52e-01 74.0% 70.4%
6f8hC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 32.0 3.41e-01 76.0% 63.4%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 31.0 3.56e-01 71.2% 75.9%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 31.0 3.58e-01 74.0% 81.1%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 46.0 4.20e-01 98.1% 87.3%
2itbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 39.0 3.24e-01 84.6% 72.2%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971977 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.89 65.0 7.46e-01 92.3% 97.5%
3279672 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 61.0 7.21e-01 70.2% 100.0%
2753461 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 61.0 7.26e-01 83.7% 98.7%
2475319 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 54.0 6.62e-01 76.9% 100.0%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 56.0 6.41e-01 77.9% 88.7%
4321867 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 55.0 6.64e-01 81.7% 100.0%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 57.0 6.59e-01 72.1% 98.7%
2440126 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 62.0 7.01e-01 82.7% 100.0%
3967757 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 55.0 6.42e-01 80.8% 97.3%
4099721 101.1.3.24 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF27685 0.80 59.0 6.07e-01 76.9% 92.0%
5022417 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.80 55.0 6.10e-01 85.6% 87.1%
4551350 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 59.0 6.22e-01 78.8% 91.6%
3286455 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.78 54.0 4.17e-01 70.2% 40.5%
3280373 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.78 58.0 6.09e-01 77.9% 96.8%
3968151 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 57.0 6.29e-01 75.0% 91.8%
3283074 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 58.0 6.34e-01 76.9% 100.0%
3290021 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.77 55.0 5.48e-01 73.1% 82.9%
3289143 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 53.0 5.89e-01 71.2% 94.1%
3946198 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 52.0 5.70e-01 70.2% 100.0%
4260337 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.73 58.0 6.08e-01 81.7% 95.8%
4314061 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.73 57.0 6.09e-01 81.7% 96.8%
3283604 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.72 57.0 5.82e-01 82.7% 97.0%
3968604 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 54.0 5.83e-01 77.9% 93.3%
3945219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 54.0 5.29e-01 78.8% 84.5%
4486954 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 61.0 6.38e-01 91.3% 98.9%
3977925 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 56.0 5.70e-01 84.6% 99.0%
3286796 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.68 55.0 5.76e-01 84.6% 100.0%