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ABN58503.1

Arc-Vir

EF071488__ABN58503.1__ORF180b__00019

Identity

Accession:
EF071488 ↗
Protein ID:
ABN58503.1 ↗
Kingdom:
archaea

Quality

68.7 mean pLDDT

Taxonomy

Pyrococcus_abyssi_virus_1

TaxID: 425386

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-160
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pbiA02 1.10.1240.60 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.74 27.0 3.22e-01 97.2% 48.5%
3mk7C01 6.10.280.130 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 26.0 3.13e-01 100.0% 64.9%
7tj9A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.53 38.0 4.27e-01 97.2% 99.1%
2kmfA01 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.52 34.0 3.90e-01 100.0% 92.2%
1j5yA02 3.30.1340.20 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain 0.51 32.0 3.70e-01 77.2% 85.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3955636 604.12.1.106 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › PF28475 0.58 29.0 4.04e-01 93.1% 93.3%
4025307 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.57 46.0 4.46e-01 100.0% 76.4%
3578140 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.52 32.0 2.35e-01 100.0% 22.3%
3870690 109.4.1.1647 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28330 0.51 34.0 3.62e-01 86.2% 76.0%
3992826 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.51 43.0 3.18e-01 91.7% 57.7%
4994376 3457.1.1.3 ↗ alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II 0.51 34.0 2.91e-01 92.4% 40.4%