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EF177456.2__ABN47331.1__X__00030
Bact-VirEF177456.2__ABN47331.1__X__00030
Identity
- Accession:
- EF177456 ↗
- Kingdom:
- phage
Quality
66.3
mean pLDDT
Taxonomy
TaxID: 424944
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-68
Domain cluster:
rep: MH051334.1__AXG50943.1__Ro145c2YLVW_00049__00049__D3-68
D2
medium
residues 141-210
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cov400 | 4.10.80.10 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › Picornavirus coat protein VP4 | 0.58 | 25.0 | 2.79e-01 | 81.4% | 47.3% |
| 3axbA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 38.0 | 2.91e-01 | 78.6% | 39.1% |
| 3g9kF01 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.52 | 39.0 | 3.16e-01 | 88.6% | 85.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3832498 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.53 | 45.0 | 3.28e-01 | 100.0% | 54.9% |
| 365672 | 210.1.6.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Gamma-glutamyltranspeptidase-like › G_glu_transpept | 0.51 | 39.0 | 3.13e-01 | 88.6% | 84.3% |
| 3960804 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.51 | 40.0 | 3.27e-01 | 87.1% | 52.6% |
D3
medium
residues 222-273