Back to structures

EF177456.2__ABN47331.1__X__00030

Bact-Vir

EF177456.2__ABN47331.1__X__00030

Identity

Accession:
EF177456 ↗
Kingdom:
phage

Quality

66.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-68
PDB
D2 medium residues 141-210
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cov400 4.10.80.10 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › Picornavirus coat protein VP4 0.58 25.0 2.79e-01 81.4% 47.3%
3axbA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.52 38.0 2.91e-01 78.6% 39.1%
3g9kF01 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.52 39.0 3.16e-01 88.6% 85.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3832498 4967.1.1.6 alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 0.53 45.0 3.28e-01 100.0% 54.9%
365672 210.1.6.1 a+b four layers › Ntn/PP2C › Ntn › Gamma-glutamyltranspeptidase-like › G_glu_transpept 0.51 39.0 3.13e-01 88.6% 84.3%
3960804 327.5.1.2 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.51 40.0 3.27e-01 87.1% 52.6%
D3 medium residues 222-273
PDB