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EF372997.1__ABP87951.1__X__00044

Bact-Vir

EF372997.1__ABP87951.1__X__00044

Identity

Accession:
EF372997 ↗
Kingdom:
phage

Quality

70.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Voetvirus› Synechococcus_phage_Syn5

TaxID: 2914003

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 608-681
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 37.0 4.49e-01 74.3% 75.0%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 43.0 4.54e-01 78.4% 67.6%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 43.0 5.01e-01 78.4% 86.8%
1uhsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 43.0 4.99e-01 78.4% 87.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 38.0 4.22e-01 73.0% 68.3%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 40.0 4.86e-01 78.4% 93.6%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 38.0 3.53e-01 75.7% 44.7%
1x2nA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 42.0 4.64e-01 78.4% 83.3%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 41.0 4.25e-01 77.0% 70.6%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 38.0 4.20e-01 74.3% 73.8%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 34.0 3.39e-01 75.7% 52.6%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.61 35.0 4.26e-01 70.3% 100.0%
6l25A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.61 51.0 3.45e-01 90.5% 28.6%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 40.0 4.09e-01 82.4% 71.8%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 39.0 4.43e-01 71.6% 92.6%
3qvmB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 40.0 2.73e-01 75.7% 29.6%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 42.0 3.16e-01 83.8% 60.2%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 36.0 3.63e-01 77.0% 64.1%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.54 38.0 4.24e-01 81.1% 98.2%
6vg5A00 1.10.10.930 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 35.0 3.41e-01 71.6% 59.3%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.77e-01 71.6% 77.6%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.52 34.0 3.42e-01 82.4% 64.5%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.52 40.0 3.87e-01 83.8% 92.7%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 30.0 3.10e-01 83.8% 58.6%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.70e-01 74.3% 85.9%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.79e-01 87.8% 82.2%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 42.0 3.45e-01 89.2% 71.4%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 43.0 3.61e-01 90.5% 69.2%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 39.0 3.96e-01 85.1% 100.0%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.50 41.0 3.97e-01 90.5% 82.9%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3660305 101.1.1.253 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.71 43.0 5.10e-01 75.7% 90.0%
3572003 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 43.0 3.62e-01 78.4% 38.3%
3815398 101.1.1.253 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.71 44.0 3.91e-01 77.0% 46.0%
3466087 101.1.1.253 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.71 43.0 5.14e-01 77.0% 92.0%
3365751 101.1.1.253 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.70 43.0 4.60e-01 77.0% 70.8%
3454275 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 42.0 5.01e-01 77.0% 90.0%
3890041 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 44.0 3.79e-01 78.4% 42.7%
3777065 101.1.1.89 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding_7 0.70 43.0 4.59e-01 77.0% 71.9%
3391180 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 43.0 3.76e-01 78.4% 42.7%
3790416 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.67 42.0 4.24e-01 78.4% 62.7%
4016103 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 40.0 4.82e-01 77.0% 90.0%
3727217 101.1.2.384 ↗ alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 0.67 39.0 4.71e-01 75.7% 88.0%
3767171 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.67 43.0 3.95e-01 79.7% 51.6%
5000156 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 41.0 4.99e-01 73.0% 94.0%
3363617 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.66 39.0 3.74e-01 74.3% 51.8%
3707222 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 44.0 4.96e-01 78.4% 90.9%
3889817 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.66 41.0 4.07e-01 78.4% 58.7%
4404513 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.65 42.0 4.25e-01 78.4% 65.3%
4939640 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.64 37.0 4.11e-01 77.0% 71.7%
3941568 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 37.0 4.30e-01 75.7% 81.8%
3340398 101.1.1.253 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.61 51.0 4.14e-01 90.5% 83.7%
3243454 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 41.0 4.45e-01 81.1% 86.7%
4102958 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.60 40.0 4.22e-01 73.0% 78.5%
4327653 101.1.1.217 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.59 35.0 4.18e-01 75.7% 97.8%
4189523 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 35.0 4.18e-01 74.3% 97.8%
4158504 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.58 32.0 3.98e-01 73.0% 88.9%
5042980 101.35.1.41 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF26555 0.57 34.0 4.01e-01 73.0% 88.0%
4995688 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 39.0 4.36e-01 85.1% 96.4%
3603105 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 39.0 3.96e-01 79.7% 72.0%
3291169 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.56 38.0 4.18e-01 73.0% 94.5%
3313889 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 36.0 4.20e-01 71.6% 100.0%
4142269 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.56 38.0 4.29e-01 75.7% 98.2%
3968886 101.1.1.77 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_50 0.55 34.0 3.60e-01 77.0% 69.2%
3969486 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.55 38.0 4.20e-01 75.7% 100.0%
3823629 246.3.1.4 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.55 46.0 3.05e-01 100.0% 43.3%
3693602 3541.1.1.2 ↗ beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG29_N 0.55 39.0 3.82e-01 87.8% 67.1%
3777242 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.54 43.0 3.80e-01 91.9% 85.8%
3945103 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 37.0 4.07e-01 73.0% 96.4%
1247969 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.54 40.0 4.08e-01 79.7% 85.9%
3434511 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 42.0 4.47e-01 97.3% 100.0%
3376744 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.58e-01 100.0% 19.0%
4928805 101.1.2.233 ↗ alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.53 39.0 3.93e-01 78.4% 98.7%
4934188 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 42.0 3.80e-01 85.1% 69.0%
3244508 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.53 38.0 4.12e-01 100.0% 98.3%
3295746 101.1.2.454 ↗ alpha arrays › HTH › HTH › winged helix domain › FAM91_N 0.51 35.0 3.52e-01 83.8% 70.7%
4024013 4954.1.1.1 ↗ a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.51 41.0 2.99e-01 93.2% 43.0%
None — 0.51 39.0 2.80e-01 85.1% 67.5%
5021144 101.1.1.545 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 0.50 34.0 3.74e-01 83.8% 96.4%
5078550 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.50 35.0 3.38e-01 85.1% 61.1%
D2 high residues 685-835
PDB
D3 medium residues 48-113
PDB
D4 medium residues 183-296
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6v9zA02 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.68 46.0 3.29e-01 78.9% 24.3%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.67 42.0 4.63e-01 72.8% 76.6%
2kbwA01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.65 42.0 3.82e-01 73.7% 49.0%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.65 42.0 3.94e-01 88.6% 52.9%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.64 47.0 5.14e-01 78.1% 95.7%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.61 39.0 4.23e-01 71.9% 77.7%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 51.0 5.00e-01 90.4% 100.0%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.61 49.0 4.88e-01 86.0% 98.3%
1owaA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 45.0 4.69e-01 78.9% 98.1%
3v5uA02 1.20.1420.30 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › NCX, central ion-binding region 0.60 43.0 3.48e-01 73.7% 76.5%
1mabG00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.60 42.0 4.11e-01 71.9% 96.0%
2zy9A03 1.10.357.20 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain 0.59 44.0 3.84e-01 78.1% 60.3%
3fiwA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 40.0 4.03e-01 73.7% 69.2%
1tt5C01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 40.0 2.87e-01 70.2% 25.7%
1a00B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 39.0 3.62e-01 73.7% 94.5%
1jgcA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 43.0 3.84e-01 83.3% 90.6%
1yuzB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 41.0 3.86e-01 83.3% 100.0%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.52 42.0 3.69e-01 87.7% 79.9%
3vvaA00 1.20.1260.140 Mainly Alpha › Up-down Bundle › Ferritin › Alternative oxidase 0.51 40.0 3.02e-01 81.6% 65.4%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3386308 604.3.1.46 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF28048 0.71 53.0 5.88e-01 84.2% 100.0%
4027782 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.71 65.0 4.53e-01 100.0% 50.4%
3822 604.4.1.1 ↗ alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › AHSP 0.69 50.0 5.48e-01 75.4% 95.6%
3296458 621.1.1.1 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C 0.68 61.0 5.21e-01 97.4% 81.1%
3259377 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.67 48.0 5.21e-01 75.4% 94.7%
5056974 2008.1.1.159 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 0.66 48.0 3.44e-01 74.6% 27.3%
3280184 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.63 48.0 4.41e-01 80.7% 96.0%
3960236 106.1.1.11 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N 0.63 49.0 4.57e-01 83.3% 100.0%
3783269 604.14.1.2 ↗ alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › Sec5 0.62 49.0 4.41e-01 83.3% 74.2%
3358939 604.3.1.11 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 0.62 51.0 3.85e-01 86.8% 75.0%
3872220 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 46.0 4.74e-01 83.3% 100.0%
5058507 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.59 45.0 4.38e-01 80.7% 86.4%
3792010 604.1.1.105 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1_2 0.57 44.0 4.54e-01 81.6% 94.3%
143217 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 43.0 4.66e-01 80.7% 98.0%
3744146 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.56 41.0 4.50e-01 76.3% 100.0%
3581267 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 40.0 4.42e-01 76.3% 100.0%
3794663 604.3.1.27 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › EMC4 0.55 40.0 4.20e-01 75.4% 95.0%
4494285 7014.1.1.1 ↗ alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.55 40.0 3.94e-01 76.3% 84.0%
3615244 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 41.0 3.63e-01 77.2% 65.6%
3934155 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 43.0 4.51e-01 85.1% 95.0%
3899959 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 41.0 4.29e-01 78.9% 100.0%
3552206 109.30.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nup84_Nup100 0.54 49.0 3.19e-01 99.1% 24.5%
3504302 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.54 40.0 4.22e-01 76.3% 100.0%
4309318 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.54 44.0 4.55e-01 85.1% 94.3%
4342803 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.54 48.0 4.92e-01 100.0% 100.0%
3192372 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.54 40.0 4.42e-01 78.9% 100.0%
4034237 5055.1.1.0 ↗ extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel 0.54 41.0 4.11e-01 92.1% 80.0%
3871065 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.54 40.0 4.01e-01 79.8% 99.2%
3758995 604.1.1.67 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_5 0.51 42.0 4.34e-01 86.8% 99.0%
3391724 109.1.1.7 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 0.51 36.0 3.19e-01 71.9% 78.2%
D5 medium residues 297-394
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.73 39.0 3.52e-01 76.5% 39.2%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.72 34.0 3.62e-01 84.7% 48.9%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 46.0 4.83e-01 80.6% 71.4%
5dqqA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 50.0 4.53e-01 83.7% 73.5%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 47.0 4.41e-01 81.6% 100.0%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.60 45.0 4.41e-01 78.6% 77.4%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.60 43.0 3.88e-01 76.5% 85.1%
2i39B00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.58 39.0 3.67e-01 82.7% 56.3%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 43.0 4.37e-01 79.6% 100.0%
3bqyA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 41.0 3.62e-01 85.7% 63.3%
4ri6A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 37.0 3.53e-01 75.5% 72.3%
3fkjA02 1.10.10.2240 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 33.0 3.87e-01 74.5% 98.4%
4iv6B01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.50 39.0 3.75e-01 84.7% 76.7%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4304474 603.1.1.212 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › CASP_dom 0.72 54.0 5.02e-01 78.6% 98.4%
3712936 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.69 47.0 3.51e-01 70.4% 89.2%
4023215 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.67 60.0 3.91e-01 100.0% 44.5%
3476112 109.23.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 › EMC6 0.65 45.0 4.65e-01 70.4% 100.0%
3628093 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.65 53.0 5.20e-01 86.7% 98.1%
3969477 4168.1.1.0 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.65 39.0 4.94e-01 71.4% 100.0%
3389031 109.4.1.726 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DHC_N1 0.64 52.0 3.49e-01 87.8% 61.6%
3921192 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 45.0 4.33e-01 76.5% 100.0%
3476230 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.54 49.0 3.39e-01 100.0% 49.6%
3709302 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.52 40.0 3.70e-01 80.6% 71.2%
3201136 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 43.0 3.10e-01 93.9% 48.3%
4269442 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.51 45.0 3.12e-01 98.0% 79.7%
2807653 4952.1.1.1 ↗ alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 0.51 32.0 2.92e-01 82.7% 48.8%
D6 medium residues 421-580
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.50 36.0 3.79e-01 74.4% 98.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4281235 3890.1.1.1 ↗ alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Bax1-I 0.51 36.0 3.24e-01 71.2% 87.7%