←Back to structures

EF460875.1__ABR68736.1__X__00024

Bact-Vir

EF460875.1__ABR68736.1__X__00024

Identity

Accession:
EF460875 ↗
Kingdom:
phage

Quality

69.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chaseviridae› Carltongylesvirus› Escherichia_phage_phiEcoM-GJ1

TaxID: 451705

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-65
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k3eA01 1.10.287.390 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 32.0 3.69e-01 77.4% 51.2%
3ke3A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.69 58.0 4.57e-01 94.3% 89.3%
5cw7B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.65 56.0 4.64e-01 100.0% 55.3%
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.60 53.0 3.37e-01 100.0% 45.9%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 46.0 3.87e-01 86.8% 78.0%
7w8fA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.53 44.0 3.16e-01 88.7% 38.3%
3h3gA03 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.52 46.0 3.78e-01 100.0% 86.0%
3jz3B01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 45.0 3.30e-01 98.1% 86.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5006473 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.70 61.0 4.17e-01 98.1% 80.0%
3935578 7577.1.1.3 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 0.63 52.0 3.03e-01 90.6% 54.7%
4886250 4205.1.1.1 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › Syd 0.62 51.0 3.59e-01 94.3% 98.4%
3616471 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.62 52.0 3.21e-01 100.0% 15.6%
3614950 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.62 55.0 3.32e-01 100.0% 14.7%
4945238 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.61 51.0 3.70e-01 94.3% 36.0%
3722379 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 52.0 3.21e-01 100.0% 16.6%
3874376 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.60 44.0 2.95e-01 79.2% 95.2%
4945573 2006.1.6.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.60 50.0 3.10e-01 90.6% 30.3%
3204382 301.7.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.58 51.0 3.55e-01 98.1% 51.4%
3614646 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 40.0 2.93e-01 75.5% 29.0%
5062752 2498.1.1.6 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 0.52 45.0 2.64e-01 100.0% 12.8%
D2 medium residues 66-133
PDB