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EF523948.1__ABP63625.1__BcepGomrgene54__00054
Bact-VirEF523948.1__ABP63625.1__BcepGomrgene54__00054
Identity
- Accession:
- EF523948 ↗
- Kingdom:
- phage
Quality
68.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-70
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kl9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.72 | 60.0 | 3.84e-01 | 98.0% | 70.2% |
| 2a7oA00 | 1.10.1740.100 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Set2, Rpb1 interacting domain | 0.71 | 59.0 | 4.91e-01 | 100.0% | 91.0% |
| 2v4iB01 | 3.30.2330.10 | Alpha Beta › 2-Layer Sandwich › arginine biosynthesis bifunctional protein fold › arginine biosynthesis bifunctional protein suprefamily | 0.70 | 55.0 | 4.92e-01 | 92.2% | 83.1% |
| 1lvlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 51.0 | 3.37e-01 | 82.4% | 93.1% |
| 4neoA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.66 | 49.0 | 4.26e-01 | 84.3% | 50.6% |
| 2w9xA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.66 | 54.0 | 3.64e-01 | 98.0% | 93.3% |
| 1dnyA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.65 | 47.0 | 4.21e-01 | 84.3% | 53.9% |
| 3cjhB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.63 | 42.0 | 4.07e-01 | 70.6% | 76.3% |
| 1b8pA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.62 | 50.0 | 3.51e-01 | 90.2% | 32.6% |
| 5hsgA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 48.0 | 3.75e-01 | 92.2% | 85.6% |
| 2o8iA00 | 1.10.3330.10 | Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | 0.61 | 51.0 | 3.71e-01 | 98.0% | 39.0% |
| 3lwsF02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 48.0 | 3.93e-01 | 90.2% | 96.2% |
| 3t54A01 | 3.40.50.11950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 49.0 | 3.98e-01 | 100.0% | 88.8% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 51.0 | 3.90e-01 | 96.1% | 69.9% |
| 1sg6A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.59 | 49.0 | 3.34e-01 | 94.1% | 57.4% |
| 2q37A00 | 1.10.3330.10 | Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | 0.59 | 49.0 | 3.66e-01 | 98.0% | 40.8% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.58 | 46.0 | 3.65e-01 | 86.3% | 77.5% |
| 7x0fB01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.57 | 41.0 | 3.78e-01 | 84.3% | 57.5% |
| 1bhdA00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.57 | 48.0 | 3.78e-01 | 96.1% | 80.6% |
| 2r9rH02 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.56 | 46.0 | 3.34e-01 | 94.1% | 67.1% |
| 2ikbC00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.56 | 48.0 | 3.43e-01 | 100.0% | 42.2% |
| 3ce9A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.55 | 47.0 | 3.19e-01 | 96.1% | 41.8% |
| 2mr7A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 42.0 | 3.46e-01 | 92.2% | 48.4% |
| 1xqrA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 41.0 | 2.61e-01 | 86.3% | 25.1% |
| 3ic9A02 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.53 | 37.0 | 3.39e-01 | 70.6% | 97.1% |
| 2o01G01 | 1.10.286.40 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › Chlorophyll a-b binding protein like | 0.51 | 35.0 | 3.18e-01 | 72.5% | 94.7% |
| 3vkgA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.50 | 43.0 | 3.33e-01 | 94.1% | 56.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3699397 | 4120.1.1.1 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › zf-Tim10_DDP | 0.68 | 46.0 | 4.28e-01 | 70.6% | 84.6% |
| 3245021 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.66 | 46.0 | 3.82e-01 | 74.5% | 100.0% |
| 3497070 | 3722.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain | 0.65 | 52.0 | 3.28e-01 | 90.2% | 29.3% |
| 4244535 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.64 | 52.0 | 3.57e-01 | 90.2% | 31.2% |
| 3738285 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.63 | 51.0 | 3.15e-01 | 92.2% | 32.6% |
| 3412191 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.62 | 47.0 | 4.02e-01 | 82.4% | 77.6% |
| 3589151 | 829.1.1.2 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 | 0.59 | 48.0 | 3.75e-01 | 94.1% | 59.2% |
| 3643796 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.59 | 48.0 | 3.12e-01 | 94.1% | 81.6% |
| 3919361 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.59 | 44.0 | 3.89e-01 | 84.3% | 91.3% |
| 4458167 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.58 | 44.0 | 3.18e-01 | 86.3% | 32.7% |
| 3367150 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.57 | 48.0 | 3.98e-01 | 98.0% | 84.2% |
| 3783451 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.57 | 47.0 | 3.86e-01 | 100.0% | 47.6% |
| 4242982 | 4120.1.1.1 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › zf-Tim10_DDP | 0.53 | 40.0 | 3.57e-01 | 80.4% | 87.1% |
| 5010937 | 2003.1.1.375 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CoA_transf_3 | 0.52 | 43.0 | 2.66e-01 | 100.0% | 37.0% |