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EF523948.1__ABP63630.1__BcepGomrgene59__00059
Bact-VirEF523948.1__ABP63630.1__BcepGomrgene59__00059
Identity
- Accession:
- EF523948 ↗
- Kingdom:
- phage
Quality
72.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-64
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zxeC02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.70 | 47.0 | 3.25e-01 | 70.9% | 85.1% |
| 3rpjA00 | 3.30.310.230 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sigma factor-binding protein Crl monomer | 0.63 | 46.0 | 3.56e-01 | 78.2% | 35.7% |
| 4ifdK02 | 6.10.250.2660 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 38.0 | 4.52e-01 | 70.9% | 97.1% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.62 | 42.0 | 3.98e-01 | 70.9% | 69.7% |
| 1rsgA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 44.0 | 2.81e-01 | 76.4% | 26.9% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.61 | 42.0 | 3.15e-01 | 72.7% | 92.4% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.60 | 39.0 | 3.68e-01 | 76.4% | 52.1% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.57 | 48.0 | 3.65e-01 | 96.4% | 79.3% |
| 5c9iD01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.56 | 47.0 | 3.40e-01 | 90.9% | 49.7% |
| 2b9wA02 | 1.10.405.20 | Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › | 0.56 | 46.0 | 3.69e-01 | 96.4% | 91.5% |
| 1p65A00 | 6.10.140.90 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 40.0 | 3.94e-01 | 90.9% | 71.9% |
| 2uvfB02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.52 | 36.0 | 2.21e-01 | 78.2% | 68.3% |
| 3gwaA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 43.0 | 3.12e-01 | 98.2% | 85.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3231096 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.72 | 50.0 | 3.22e-01 | 72.7% | 20.0% |
| 4928248 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 55.0 | 4.18e-01 | 92.7% | 84.6% |
| 3169371 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.61 | 45.0 | 3.05e-01 | 76.4% | 28.6% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 38.0 | 3.60e-01 | 98.2% | 53.8% |
| 4929264 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.51 | 40.0 | 2.83e-01 | 92.7% | 82.5% |