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EF579802.1__ABR10443.1__X__00013

Bact-Vir

EF579802.1__ABR10443.1__X__00013

Identity

Accession:
EF579802 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Minunavirus› Microbacterium_phage_Min1

TaxID: 446529

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-115
PDB
Domain cluster: rep: MH825712.1__AYD87401.1__SEA_VALENTINIPUFF_107__00107__D2-98
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4damC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 29.0 3.06e-01 99.1% 52.0%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 39.0 3.29e-01 76.8% 71.0%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 29.0 2.98e-01 97.3% 55.8%
2i46A00 2.40.50.960 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 32.0 2.98e-01 75.9% 45.4%
4fnfA00 2.40.50.50 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 27.0 2.91e-01 100.0% 56.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4535633 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 29.0 3.45e-01 99.1% 61.3%
2330653 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.61 35.0 3.74e-01 99.1% 63.8%
3741507 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.60 33.0 3.51e-01 96.4% 59.0%
5082519 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 47.0 3.90e-01 99.1% 90.0%
5058885 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 38.0 3.41e-01 77.7% 84.4%
3809285 3767.1.1.0 ↗ a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain 0.50 36.0 3.01e-01 73.2% 59.5%