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EF579802.1__ABR10473.1__X__00043

Bact-Vir

EF579802.1__ABR10473.1__X__00043

Identity

Accession:
EF579802 ↗
Kingdom:
phage

Quality

67.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-80
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3anwA02 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.71 48.0 5.32e-01 73.0% 89.7%
4umwA02 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.70 48.0 4.47e-01 73.0% 58.4%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 46.0 4.09e-01 73.0% 53.3%
3fjsC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 45.0 3.96e-01 71.6% 49.5%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 45.0 3.75e-01 71.6% 45.9%
2pfwA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 43.0 3.78e-01 71.6% 45.9%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 44.0 3.95e-01 71.6% 51.9%
2f4pA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 44.0 3.64e-01 71.6% 41.8%
5by5A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.83e-01 71.6% 49.6%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.96e-01 71.6% 52.9%
3es1A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.70e-01 71.6% 43.7%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.74e-01 71.6% 45.8%
1gqgC01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.56e-01 71.6% 39.3%
3myxB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 43.0 3.68e-01 71.6% 42.6%
3es4A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.77e-01 71.6% 46.6%
3h8uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 44.0 3.69e-01 71.6% 46.7%
1o4tA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 43.0 3.73e-01 71.6% 48.7%
1zx5A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 43.0 4.16e-01 71.6% 63.9%
1y9qA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 42.0 3.93e-01 71.6% 55.9%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 43.0 3.77e-01 71.6% 49.1%
4b29A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 43.0 3.15e-01 71.6% 28.2%
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 42.0 3.89e-01 71.6% 55.6%
5h5oA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 44.0 3.77e-01 77.0% 60.8%
2yzhA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 44.0 3.48e-01 78.4% 84.7%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 42.0 3.96e-01 71.6% 64.8%
2mngA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 42.0 3.52e-01 73.0% 45.8%
5e16A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 42.0 3.44e-01 74.3% 48.6%
2p17A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 46.0 3.22e-01 85.1% 73.0%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.59 40.0 3.37e-01 71.6% 48.6%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 43.0 3.56e-01 77.0% 50.7%
1o5uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 40.0 3.85e-01 71.6% 61.4%
3cf6E02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 41.0 3.59e-01 74.3% 62.1%
4myjA04 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 41.0 3.47e-01 74.3% 48.1%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 2.97e-01 87.8% 70.5%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 38.0 3.02e-01 73.0% 59.0%
2yz2B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 35.0 2.48e-01 73.0% 70.0%
2mhfA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 39.0 3.31e-01 86.5% 63.0%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4404714 4076.3.1.9 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF1_C 0.79 51.0 5.94e-01 70.3% 92.5%
4935547 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.78 51.0 6.00e-01 70.3% 98.0%
3929096 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.78 50.0 5.97e-01 70.3% 98.0%
3407377 4076.3.1.9 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF1_C 0.77 51.0 5.61e-01 71.6% 84.7%
4932084 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.77 51.0 5.98e-01 73.0% 100.0%
4951589 4076.3.1.5 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C 0.77 50.0 5.89e-01 70.3% 98.0%
4973337 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.75 49.0 5.56e-01 71.6% 90.9%
4016056 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.67 46.0 3.52e-01 71.6% 33.9%
4681454 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.66 46.0 3.40e-01 71.6% 32.2%
3720434 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.66 46.0 3.38e-01 71.6% 30.3%
4995865 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.66 45.0 3.81e-01 71.6% 46.4%
3200999 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.66 45.0 3.70e-01 71.6% 44.0%
5037411 304.22.1.0 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain 0.65 45.0 4.07e-01 71.6% 97.0%
3731922 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.65 45.0 3.71e-01 71.6% 43.1%
3970207 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.65 45.0 3.98e-01 71.6% 55.2%
3193522 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.65 45.0 3.05e-01 71.6% 21.5%
3265780 3529.1.1.1 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault 0.65 45.0 4.88e-01 73.0% 88.3%
4006496 10.12.1.116 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30441 0.65 50.0 4.16e-01 85.1% 90.4%
3696518 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.65 44.0 3.71e-01 71.6% 43.2%
4933556 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.64 44.0 3.83e-01 71.6% 47.3%
331943 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.64 44.0 3.78e-01 71.6% 46.2%
5006901 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.64 44.0 3.86e-01 71.6% 50.9%
3732432 10.12.1.32 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › EutQ 0.64 44.0 3.76e-01 71.6% 45.0%
5049153 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.64 44.0 3.73e-01 71.6% 45.0%
200089 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.64 44.0 3.77e-01 71.6% 46.6%
134819 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.64 44.0 3.69e-01 71.6% 46.7%
3348374 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.63 43.0 4.08e-01 71.6% 60.0%
3741599 10.12.1.5 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.63 43.0 4.00e-01 71.6% 57.9%
4132202 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.62 42.0 3.77e-01 71.6% 50.9%
3633929 10.12.1.5 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.62 43.0 3.64e-01 71.6% 50.0%
4978020 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.62 42.0 3.83e-01 71.6% 53.4%
2405047 10.12.1.33 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ectoine_synth 0.62 42.0 3.46e-01 71.6% 39.9%
3403797 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.62 43.0 3.24e-01 74.3% 47.4%
2391024 10.12.1.33 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ectoine_synth 0.62 42.0 3.47e-01 71.6% 39.9%
3969466 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.62 42.0 3.59e-01 71.6% 43.3%
3557677 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 43.0 4.42e-01 73.0% 94.3%
3968655 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.61 41.0 3.67e-01 71.6% 47.7%
3232142 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.61 43.0 3.31e-01 74.3% 56.0%
3963751 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.61 42.0 3.76e-01 71.6% 52.4%
3972519 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.61 41.0 3.59e-01 71.6% 45.2%
164729 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.61 42.0 3.71e-01 71.6% 53.8%
3367439 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.61 43.0 3.01e-01 74.3% 33.8%
2063085 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.60 42.0 3.45e-01 74.3% 46.5%
3341765 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.60 43.0 3.03e-01 74.3% 34.8%
3718766 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.60 43.0 3.57e-01 75.7% 50.4%
3779389 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.60 42.0 3.23e-01 74.3% 53.3%
3759402 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.47e-01 74.3% 100.0%
3598592 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.59 42.0 3.47e-01 75.7% 48.6%
3554758 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.59 42.0 3.06e-01 75.7% 32.6%
4982421 10.12.1.27 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 0.59 40.0 4.00e-01 71.6% 67.1%
3779679 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.59 41.0 2.76e-01 74.3% 20.3%
3215294 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.59 42.0 3.29e-01 75.7% 52.1%
3916871 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 42.0 3.41e-01 75.7% 46.2%
3532264 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.59 41.0 3.31e-01 74.3% 41.3%
3585983 10.12.1.97 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CNBH_CNNM2_C 0.58 42.0 3.14e-01 75.7% 53.2%
3494269 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.58 41.0 2.68e-01 74.3% 18.6%
3613430 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.58 41.0 3.59e-01 75.7% 57.5%
3717688 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.58 41.0 3.37e-01 75.7% 47.6%
3492162 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.57 41.0 3.31e-01 75.7% 44.7%
3514819 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.57 41.0 2.77e-01 75.7% 22.3%
4010516 10.12.1.8 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.57 44.0 3.57e-01 83.8% 53.1%
4304839 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.57 39.0 3.15e-01 73.0% 38.7%
3195147 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 38.0 2.88e-01 74.3% 48.1%
4532030 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.53 37.0 2.91e-01 73.0% 77.1%
4121124 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.51 42.0 2.87e-01 90.5% 85.4%
3979741 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.51 36.0 2.65e-01 75.7% 60.9%