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EF579802.1__ABR10485.1__X__00056

Bact-Vir

EF579802.1__ABR10485.1__X__00056

Identity

Accession:
EF579802 ↗
Kingdom:
phage

Quality

65.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-197
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 65.0 4.93e-01 100.0% 40.3%
5olpA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 65.0 4.88e-01 95.4% 40.5%
4c2lA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 62.0 4.92e-01 100.0% 46.8%
2vjiA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 66.0 4.99e-01 99.0% 47.8%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.69 36.0 4.97e-01 86.7% 100.0%
1hg8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 60.0 4.87e-01 92.9% 51.9%
1h80B00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 62.0 4.64e-01 94.4% 54.9%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 44.0 4.93e-01 99.0% 82.2%
3n6zA01 2.160.20.110 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.65 61.0 5.50e-01 100.0% 89.4%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 60.0 4.85e-01 99.0% 56.4%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 59.0 4.18e-01 97.4% 39.2%
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.63 59.0 4.37e-01 98.0% 63.8%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.63 44.0 4.87e-01 97.4% 87.3%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.62 34.0 4.18e-01 91.8% 83.6%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.62 47.0 4.71e-01 96.4% 77.2%
5gkqB01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.62 58.0 4.53e-01 100.0% 55.4%
1dbgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.62 57.0 4.22e-01 99.0% 80.9%
1o88A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.61 54.0 4.38e-01 98.5% 51.7%
3eqnA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.61 53.0 4.38e-01 91.8% 63.2%
2pygA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.61 57.0 4.52e-01 99.0% 52.7%
3vmvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.61 57.0 4.72e-01 98.5% 72.8%
1jtaA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.60 56.0 4.49e-01 98.0% 80.3%
3grhA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.60 56.0 4.42e-01 100.0% 71.0%
7o79A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.60 57.0 4.43e-01 100.0% 58.5%
1xkuA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.60 43.0 3.68e-01 97.4% 45.9%
2bm5B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.60 41.0 4.30e-01 96.9% 75.0%
3vsvA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.60 55.0 4.03e-01 99.5% 76.1%
4hwvB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.59 55.0 4.06e-01 100.0% 45.6%
3ljyA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.59 43.0 4.04e-01 99.5% 61.5%
1qjvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.59 53.0 4.40e-01 97.4% 81.9%
1idjA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.58 54.0 4.36e-01 98.5% 85.0%
1ru4A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.58 53.0 4.16e-01 98.5% 79.0%
3b4nA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.58 54.0 5.10e-01 100.0% 85.0%
5gkdA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.58 53.0 4.66e-01 99.0% 75.4%
8tmsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.58 54.0 4.72e-01 99.5% 95.0%
1dabA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.57 53.0 3.79e-01 98.0% 43.4%
3zscA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.57 52.0 4.32e-01 96.4% 88.8%
2yuhA01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.57 43.0 4.57e-01 99.5% 87.8%
4nk6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.56 51.0 3.96e-01 98.0% 66.3%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.56 52.0 4.95e-01 100.0% 92.0%
4kh3A00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.56 43.0 3.13e-01 98.5% 31.3%
2w7zA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.55 42.0 4.14e-01 97.4% 74.9%
4v2dA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.55 43.0 3.68e-01 95.9% 50.5%
1gq8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.55 50.0 4.23e-01 99.0% 79.9%
1wwlB00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.53 45.0 3.84e-01 94.9% 56.4%
3ak5D02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.51 44.0 3.06e-01 93.9% 44.9%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4522677 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.77 64.0 4.84e-01 100.0% 39.0%
2139004 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.75 65.0 4.89e-01 95.4% 40.6%
4856486 207.9.1.5 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › LD_SV2 0.75 39.0 5.13e-01 86.2% 89.2%
None 0.73 38.0 5.16e-01 82.7% 97.0%
4030372 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.72 43.0 5.15e-01 95.9% 85.9%
3194802 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.68 63.0 4.81e-01 96.9% 73.1%
3459646 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.68 45.0 4.80e-01 99.0% 76.9%
3786676 207.4.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.68 40.0 4.51e-01 94.9% 74.2%
4406918 207.6.1.16 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP 0.66 40.0 4.79e-01 100.0% 88.5%
5047146 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.65 52.0 5.44e-01 99.0% 87.6%
3708794 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.65 45.0 4.81e-01 99.0% 80.5%
3634222 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.65 43.0 4.78e-01 99.5% 81.9%
3599244 207.4.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like 0.64 44.0 4.69e-01 99.5% 79.4%
5045053 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.64 59.0 4.61e-01 98.0% 68.6%
3425805 208.2.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain 0.63 31.0 3.94e-01 96.4% 77.5%
4980606 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.62 46.0 4.96e-01 100.0% 88.2%
4029787 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.62 40.0 3.83e-01 99.5% 55.7%
5078365 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.62 51.0 5.09e-01 98.5% 82.0%
3711105 208.7.1.6 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Nucleoporin_FG 0.61 31.0 3.49e-01 97.4% 62.0%
3686362 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.61 57.0 5.17e-01 99.0% 97.3%
3802732 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.61 57.0 4.63e-01 98.5% 64.4%
3599238 207.4.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like 0.60 46.0 4.88e-01 100.0% 89.4%
4014339 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.60 53.0 4.61e-01 98.0% 62.8%
4945679 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.60 54.0 4.79e-01 99.0% 68.5%
3254326 207.2.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP 0.60 55.0 4.58e-01 98.0% 76.4%
5067457 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.59 56.0 4.24e-01 98.5% 48.6%
4970160 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.59 51.0 4.01e-01 96.4% 45.4%
4982113 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.59 52.0 4.80e-01 99.5% 73.5%
5020689 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.59 55.0 4.74e-01 96.9% 77.2%
5044622 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.59 55.0 3.86e-01 98.5% 37.2%
4027894 207.4.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.59 38.0 3.96e-01 89.8% 68.6%
5050988 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.59 53.0 4.73e-01 95.4% 70.7%
3256108 207.2.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP 0.58 54.0 4.80e-01 99.5% 86.3%
4972655 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.58 50.0 3.92e-01 91.3% 63.0%
3255221 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.58 53.0 4.72e-01 97.4% 75.6%
3612083 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.58 45.0 4.29e-01 100.0% 68.4%
4021507 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.58 51.0 4.87e-01 100.0% 80.8%
5047058 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.57 53.0 4.16e-01 96.9% 50.4%
4954875 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.57 52.0 3.83e-01 95.9% 40.8%
4663567 207.6.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Ice_nucleation 0.57 38.0 2.67e-01 99.0% 22.0%
4946574 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.56 51.0 4.66e-01 99.0% 74.1%
3264625 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.56 36.0 3.67e-01 93.9% 65.3%
3639076 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.56 40.0 4.23e-01 100.0% 80.6%
5034452 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.56 52.0 4.70e-01 99.0% 75.5%
3246237 207.4.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC 0.55 39.0 4.30e-01 94.9% 88.6%
3336085 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.54 43.0 4.32e-01 96.9% 80.8%
5033178 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.54 50.0 4.38e-01 99.0% 70.9%
5001276 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.53 49.0 4.24e-01 98.5% 70.2%
4970153 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.53 49.0 3.25e-01 99.0% 27.6%
3935084 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.52 46.0 4.01e-01 94.4% 62.0%
3585546 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.52 39.0 3.67e-01 92.3% 63.3%
3903674 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.50 34.0 3.25e-01 94.4% 58.3%