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EF583821.1ABS83738.10305phi8-36p180__00081

Bact-Vir

EF583821.1__ABS83738.1__0305phi8-36p180__00081

Identity

Accession:: EF583821 ↗
Kingdom:: phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_0305phi8-36

TaxID: 458639

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 126-211

PDB

Domain cluster: representative

CATH (22)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5ubvA02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.63	47.0	5.04e-01	84.9%	95.8%
2x8aA02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.63	49.0	5.08e-01	93.0%	92.5%
3whkA02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.62	46.0	4.91e-01	84.9%	94.4%
2w0gA00	1.20.58.610	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain	0.61	45.0	3.96e-01	77.9%	85.3%
7kypB01	1.10.3470.10	Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC	0.61	44.0	3.14e-01	76.7%	29.6%
1tj7A03	1.10.40.30	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain)	0.60	35.0	3.81e-01	74.4%	69.0%
2ffjA01	1.10.8.380	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1	0.58	34.0	4.03e-01	70.9%	87.5%
2ifcA01	1.10.580.10	Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1	0.58	52.0	3.69e-01	96.5%	73.0%
3h4cA02	1.10.472.110	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 ›	0.58	40.0	3.82e-01	74.4%	62.7%
7jv7B01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.57	42.0	3.59e-01	79.1%	77.4%
3q23A04	6.10.140.1370	Special › Helix non-globular › Helix Hairpins ›	0.56	36.0	3.54e-01	100.0%	60.4%
1zp2A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.55	41.0	3.78e-01	79.1%	97.3%
4hteA01	1.20.58.1730	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.53	43.0	3.70e-01	90.7%	95.8%
2gfhA02	1.20.120.710	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain	0.52	36.0	3.68e-01	72.1%	72.1%
5xs2B02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	41.0	3.61e-01	86.0%	61.4%
2w02B01	1.10.150.640	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle	0.52	34.0	3.68e-01	96.5%	78.4%
2lwxA00	1.10.8.840	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain	0.52	36.0	3.64e-01	80.2%	71.6%
3dd7C00	1.20.120.1870	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain	0.52	41.0	3.75e-01	89.5%	96.7%
1w98B01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.51	38.0	3.23e-01	79.1%	57.1%
2zgyA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.51	31.0	2.71e-01	83.7%	37.1%
1iv8A04	1.10.10.470	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4	0.51	36.0	3.52e-01	79.1%	67.0%
3fajA00	1.20.120.950	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062	0.50	37.0	3.51e-01	76.7%	77.2%

ECOD (20)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4944080	169.1.1.1 ↗	alpha complex topology › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › AFOR_C	0.67	60.0	3.86e-01	100.0%	62.7%
3926386	148.1.3.19 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3	0.67	51.0	5.19e-01	82.6%	83.5%
3385104	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.66	49.0	5.09e-01	84.9%	86.3%
4012006	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.66	49.0	5.02e-01	84.9%	81.2%
3721061	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.64	49.0	5.06e-01	83.7%	87.5%
5061574	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.64	49.0	5.14e-01	84.9%	93.3%
4672223	148.1.3.19 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3	0.64	47.0	4.95e-01	81.4%	90.7%
3456399	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.63	48.0	4.05e-01	86.0%	47.3%
3305472	148.1.3.19 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3	0.63	47.0	4.64e-01	86.0%	74.7%
4584357	103.4.1.0 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein	0.62	49.0	4.98e-01	84.9%	92.8%
4991127	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.61	42.0	3.87e-01	75.6%	55.5%
3386111	6130.1.1.0 ↗	alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain	0.59	38.0	4.18e-01	76.7%	80.0%
4600610	181.1.1.1 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N	0.56	38.0	3.75e-01	77.9%	63.2%
5024936	181.1.1.1 ↗	alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N	0.56	35.0	3.77e-01	77.9%	73.3%
3916041	106.1.1.0 ↗	alpha arrays › Globin-like › Globin-like › Globin-like	0.55	42.0	3.65e-01	81.4%	77.8%
3524656	64.1.1.0 ↗	beta meanders › WW domain-like › WW domain › WW domain	0.54	45.0	4.03e-01	95.3%	66.4%
5025138	101.1.10.80 ↗	alpha arrays › HTH › HTH › Cyclin-like › Zn_Ribbon_TF	0.53	43.0	3.31e-01	87.2%	54.0%
3968973	191.1.1.0 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain	0.52	41.0	3.67e-01	84.9%	67.2%
3213401	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.51	39.0	3.93e-01	89.5%	82.2%
4983607	3352.1.1.0 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain	0.51	42.0	2.78e-01	95.3%	93.4%

D2 medium residues 1-125

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4dwpA01	6.10.140.1780	Special › Helix non-globular › Helix Hairpins ›	0.66	26.0	3.02e-01	98.4%	48.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5066370	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.51	36.0	2.31e-01	72.0%	34.0%