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EF583821.1__ABS83780.1__0305phi8-36p222__00123
Bact-VirEF583821.1__ABS83780.1__0305phi8-36p222__00123
Identity
- Accession:
- EF583821 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-87
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.64 | 46.0 | 5.02e-01 | 87.5% | 96.0% |
| 2hp7A00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.64 | 57.0 | 4.12e-01 | 100.0% | 47.5% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.64 | 45.0 | 4.44e-01 | 100.0% | 71.6% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.61 | 43.0 | 4.34e-01 | 92.2% | 74.2% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.58 | 39.0 | 4.30e-01 | 84.4% | 91.8% |
| 3afoB02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.58 | 46.0 | 3.70e-01 | 90.6% | 100.0% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.57 | 49.0 | 4.35e-01 | 98.4% | 90.4% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.57 | 41.0 | 3.26e-01 | 96.9% | 36.0% |
| 3besR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.77e-01 | 100.0% | 51.4% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 45.0 | 4.29e-01 | 90.6% | 81.6% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.55 | 48.0 | 4.25e-01 | 100.0% | 81.2% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.57e-01 | 100.0% | 51.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.54 | 46.0 | 4.17e-01 | 98.4% | 92.4% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.54 | 38.0 | 4.22e-01 | 84.4% | 98.0% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 45.0 | 3.42e-01 | 98.4% | 91.6% |
| 4czwA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 40.0 | 2.53e-01 | 84.4% | 82.7% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.53 | 40.0 | 3.70e-01 | 100.0% | 63.9% |
| 2r7kA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 36.0 | 3.72e-01 | 89.1% | 80.3% |
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.52 | 43.0 | 4.09e-01 | 100.0% | 94.9% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.52e-01 | 100.0% | 58.7% |
| 2hfqA00 | 3.10.510.10 | Alpha Beta › Roll › NE1680-like fold › NE1680-like | 0.51 | 44.0 | 3.99e-01 | 95.3% | 90.6% |
| 1e25A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 38.0 | 2.57e-01 | 84.4% | 83.1% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4931464 | 822.3.1.0 ↗ | a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 | 0.69 | 53.0 | 5.11e-01 | 84.4% | 76.0% |
| 3637444 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.65 | 56.0 | 3.80e-01 | 100.0% | 67.1% |
| 4956952 | 75.1.1.4 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Cyclophil_like | 0.64 | 46.0 | 3.78e-01 | 76.6% | 100.0% |
| 4231372 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.64 | 49.0 | 4.79e-01 | 84.4% | 100.0% |
| 4943252 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.63 | 52.0 | 4.03e-01 | 96.9% | 40.7% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.63 | 49.0 | 4.72e-01 | 87.5% | 100.0% |
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.62 | 47.0 | 4.59e-01 | 82.8% | 100.0% |
| 3504586 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.61 | 48.0 | 3.61e-01 | 96.9% | 34.8% |
| 3847414 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.60 | 50.0 | 3.37e-01 | 100.0% | 77.2% |
| 4990489 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 44.0 | 4.86e-01 | 82.8% | 100.0% |
| 5049794 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.60 | 49.0 | 3.85e-01 | 96.9% | 40.7% |
| 5032187 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 43.0 | 4.56e-01 | 78.1% | 96.4% |
| 4151900 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.59 | 48.0 | 3.77e-01 | 96.9% | 41.0% |
| 3553704 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.58 | 46.0 | 4.18e-01 | 100.0% | 63.3% |
| 5045852 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.57 | 46.0 | 3.84e-01 | 87.5% | 55.5% |
| 3726900 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.57 | 44.0 | 3.76e-01 | 85.9% | 57.3% |
| 5068178 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.57 | 46.0 | 4.03e-01 | 87.5% | 68.4% |
| 5074648 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 47.0 | 4.49e-01 | 90.6% | 82.7% |
| 3936459 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.00e-01 | 98.4% | 52.8% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.57 | 46.0 | 4.44e-01 | 90.6% | 82.7% |
| 5030993 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.57 | 47.0 | 4.34e-01 | 90.6% | 77.5% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 46.0 | 3.98e-01 | 90.6% | 61.4% |
| 3751173 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.56 | 48.0 | 4.65e-01 | 98.4% | 100.0% |
| 3701633 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 37.0 | 3.42e-01 | 92.2% | 50.6% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 44.0 | 4.63e-01 | 85.9% | 96.6% |
| 4979507 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.56 | 46.0 | 3.54e-01 | 96.9% | 39.6% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.56 | 44.0 | 4.50e-01 | 85.9% | 90.5% |
| 3179826 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.55 | 43.0 | 3.51e-01 | 85.9% | 53.6% |
| 4928621 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.55 | 44.0 | 3.57e-01 | 96.9% | 42.9% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 45.0 | 4.40e-01 | 90.6% | 90.0% |
| 2512518 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 44.0 | 3.87e-01 | 90.6% | 61.4% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 44.0 | 4.59e-01 | 87.5% | 96.7% |
| 1003912 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.55 | 48.0 | 4.25e-01 | 100.0% | 81.2% |
| 4013514 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 46.0 | 3.97e-01 | 95.3% | 60.0% |
| 4160542 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 43.0 | 4.45e-01 | 84.4% | 96.6% |
| 2106285 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 45.0 | 3.87e-01 | 93.8% | 57.4% |
| 3227513 | 3115.1.1.3 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › NRF | 0.54 | 43.0 | 3.69e-01 | 87.5% | 55.2% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.54 | 47.0 | 4.23e-01 | 100.0% | 95.6% |
| 4301105 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.54 | 45.0 | 3.91e-01 | 98.4% | 60.0% |
| 3177995 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.53 | 43.0 | 2.60e-01 | 95.3% | 80.7% |
| 3789334 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.53 | 42.0 | 3.58e-01 | 87.5% | 53.3% |
| 5039449 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.53 | 42.0 | 3.57e-01 | 87.5% | 54.3% |
| 3467170 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.52 | 41.0 | 4.21e-01 | 87.5% | 95.2% |
| 3738589 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.52 | 41.0 | 3.51e-01 | 87.5% | 54.3% |
| 3491652 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 44.0 | 4.06e-01 | 100.0% | 88.2% |
| 3744530 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.51 | 41.0 | 3.44e-01 | 87.5% | 51.8% |
| 5074679 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.51 | 38.0 | 3.09e-01 | 82.8% | 41.5% |
| 5048876 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.51 | 38.0 | 3.88e-01 | 100.0% | 86.2% |
| 3603767 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.51 | 41.0 | 3.47e-01 | 87.5% | 54.3% |
| 5018298 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.51 | 41.0 | 3.36e-01 | 87.5% | 49.6% |
| 5022263 | 322.1.1.2 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › 3H | 0.51 | 43.0 | 3.68e-01 | 100.0% | 75.5% |