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EF653453.1__ABS50442.1__X__00001
Bact-VirEF653453.1__ABS50442.1__X__00001
Identity
- Accession:
- EF653453 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 117-310
Domain cluster:
rep: MH494197.1__AXC39221.1__X__00509__D22-210
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13481.13 best | AAA_25 | 33.9 | 3.40e-08 | 95.9% | 75.9% |
| PF03796.22 | DnaB_C | 34.8 | 1.70e-08 | 95.4% | 41.2% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8dtpC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.84 | 72.0 | 6.42e-01 | 95.4% | 66.9% |
| 1cr2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.82 | 68.0 | 6.27e-01 | 100.0% | 69.0% |
| 3bh0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 75.0 | 6.41e-01 | 100.0% | 65.1% |
| 3jzmA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 60.0 | 5.45e-01 | 100.0% | 59.7% |
| 2w0mA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 61.0 | 5.83e-01 | 99.5% | 69.1% |
| 8db3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 59.0 | 5.73e-01 | 98.5% | 70.2% |
| 2dr3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 61.0 | 5.67e-01 | 99.5% | 68.1% |
| 8fazD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 61.0 | 5.71e-01 | 100.0% | 69.3% |
| 4wiaC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 57.0 | 5.38e-01 | 99.5% | 67.7% |
| 2h0aA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 24.0 | 3.17e-01 | 72.7% | 57.1% |
| 4evqA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 31.0 | 3.14e-01 | 74.7% | 46.0% |
| 4d2iA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 4.37e-01 | 98.5% | 61.1% |
| 2bjvA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 35.0 | 3.86e-01 | 96.4% | 71.7% |
| 2fi1A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.58 | 34.0 | 4.09e-01 | 98.5% | 87.8% |
| 3fniA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.56 | 27.0 | 2.99e-01 | 73.7% | 53.9% |
| 3jyoA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.56 | 31.0 | 3.58e-01 | 75.3% | 72.7% |
| 1gkuB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 50.0 | 4.87e-01 | 97.9% | 95.8% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 31.0 | 3.07e-01 | 95.9% | 51.2% |
| 3zxsA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 33.0 | 3.59e-01 | 98.5% | 75.0% |
| 6x50A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 46.0 | 4.54e-01 | 97.4% | 92.4% |
| 1jhdA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 35.0 | 3.45e-01 | 99.0% | 65.0% |
| 3da8B00 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 30.0 | 3.00e-01 | 99.0% | 52.2% |
| 3dkpA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 4.17e-01 | 95.4% | 87.5% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3510702 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.90 | 73.0 | 6.58e-01 | 100.0% | 64.8% |
| 4030913 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.89 | 75.0 | 6.65e-01 | 99.5% | 64.7% |
| None | — | 0.87 | 62.0 | 5.71e-01 | 100.0% | 59.6% | |
| 3942586 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.86 | 75.0 | 6.65e-01 | 100.0% | 66.5% |
| None | — | 0.86 | 61.0 | 5.84e-01 | 100.0% | 64.1% | |
| 3512712 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.84 | 71.0 | 4.96e-01 | 98.5% | 31.2% |
| 5012533 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.84 | 60.0 | 5.67e-01 | 100.0% | 63.2% |
| 5007981 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.82 | 60.0 | 5.73e-01 | 100.0% | 66.1% |
| 4991600 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 57.0 | 5.73e-01 | 100.0% | 69.3% |
| 1497950 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.82 | 69.0 | 5.66e-01 | 99.0% | 52.3% |
| 4622799 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.82 | 60.0 | 5.65e-01 | 100.0% | 63.5% |
| 4994098 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.81 | 61.0 | 5.65e-01 | 100.0% | 63.9% |
| 3081874 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.80 | 73.0 | 6.29e-01 | 100.0% | 64.4% |
| 135757 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.80 | 60.0 | 5.30e-01 | 100.0% | 56.1% |
| 4437580 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.79 | 60.0 | 5.42e-01 | 100.0% | 59.6% |
| 5001907 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.79 | 60.0 | 5.64e-01 | 100.0% | 64.8% |
| 5070821 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.79 | 61.0 | 5.83e-01 | 98.5% | 70.2% |
| 3583703 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.79 | 76.0 | 6.52e-01 | 99.5% | 68.8% |
| 4163070 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 62.0 | 5.38e-01 | 100.0% | 56.4% |
| 5025681 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.79 | 59.0 | 5.60e-01 | 99.5% | 65.9% |
| 5036001 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.79 | 62.0 | 5.52e-01 | 99.5% | 59.6% |
| 3510843 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.79 | 72.0 | 6.53e-01 | 100.0% | 74.7% |
| 5008124 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.78 | 58.0 | 5.51e-01 | 98.5% | 65.9% |
| 4989687 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.78 | 56.0 | 5.44e-01 | 100.0% | 66.5% |
| 5012666 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.78 | 61.0 | 5.72e-01 | 97.9% | 68.9% |
| 5023685 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.78 | 61.0 | 5.28e-01 | 100.0% | 55.1% |
| 3230061 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.78 | 74.0 | 6.38e-01 | 99.5% | 68.0% |
| 4931190 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.77 | 56.0 | 5.47e-01 | 99.5% | 68.1% |
| 3504456 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.77 | 62.0 | 5.71e-01 | 100.0% | 66.1% |
| 5002228 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.77 | 62.0 | 5.85e-01 | 100.0% | 70.4% |
| 5007876 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.77 | 61.0 | 5.75e-01 | 99.5% | 69.1% |
| 4962866 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.77 | 58.0 | 5.52e-01 | 100.0% | 66.7% |
| 5031184 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.77 | 58.0 | 6.45e-01 | 100.0% | 96.8% |
| 5008121 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.76 | 59.0 | 5.52e-01 | 100.0% | 66.5% |
| 5069927 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.76 | 57.0 | 5.37e-01 | 100.0% | 65.6% |
| 4943410 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.76 | 58.0 | 5.37e-01 | 98.5% | 63.8% |
| 5045344 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.76 | 57.0 | 5.44e-01 | 99.0% | 66.7% |
| 4945366 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.76 | 60.0 | 5.59e-01 | 99.0% | 68.3% |
| 5018155 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.75 | 60.0 | 5.55e-01 | 99.5% | 66.3% |
| 5025002 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.75 | 56.0 | 5.30e-01 | 100.0% | 64.6% |
| 4935234 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.75 | 58.0 | 5.43e-01 | 100.0% | 65.5% |
| 5075266 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.75 | 57.0 | 5.39e-01 | 100.0% | 65.7% |
| 5074076 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.75 | 61.0 | 5.70e-01 | 99.5% | 69.8% |
| 5026350 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.75 | 59.0 | 5.54e-01 | 100.0% | 68.7% |
| 5023029 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.75 | 59.0 | 5.40e-01 | 100.0% | 63.6% |
| 4417234 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.74 | 55.0 | 5.21e-01 | 100.0% | 64.3% |
| 5013929 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.74 | 60.0 | 5.64e-01 | 98.5% | 70.0% |
| 5073609 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.74 | 56.0 | 5.33e-01 | 99.0% | 67.1% |
| 4934507 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.74 | 58.0 | 5.29e-01 | 100.0% | 63.7% |
| 4927781 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.74 | 57.0 | 5.39e-01 | 100.0% | 67.4% |
| 4973694 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 70.0 | 5.67e-01 | 100.0% | 57.1% |
| 5039764 | 2004.1.1.1217 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 | 0.73 | 58.0 | 5.42e-01 | 99.0% | 68.3% |
| 4942492 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.73 | 57.0 | 5.30e-01 | 100.0% | 65.5% |
| 5070364 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.72 | 61.0 | 5.65e-01 | 100.0% | 71.8% |
| 5034818 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.72 | 56.0 | 5.27e-01 | 99.0% | 67.0% |
| 5071391 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.72 | 61.0 | 5.55e-01 | 99.5% | 69.0% |
| 4979936 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.72 | 60.0 | 5.51e-01 | 100.0% | 69.6% |
| 4967311 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.72 | 57.0 | 5.30e-01 | 100.0% | 66.8% |
| 5028614 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.72 | 59.0 | 5.43e-01 | 99.5% | 68.8% |
| 4947514 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 62.0 | 5.55e-01 | 99.5% | 67.3% |
| 5067460 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.71 | 60.0 | 5.40e-01 | 100.0% | 66.3% |
| 5072816 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.71 | 58.0 | 5.43e-01 | 100.0% | 70.2% |
| 5032915 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.71 | 60.0 | 5.42e-01 | 100.0% | 67.6% |
| 4946480 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 59.0 | 5.40e-01 | 100.0% | 68.0% |
| 5071695 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.70 | 58.0 | 5.27e-01 | 99.5% | 65.5% |
| 4988476 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 58.0 | 5.54e-01 | 100.0% | 75.5% |
| 4965193 | 2004.1.1.1219 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7504 | 0.70 | 56.0 | 5.56e-01 | 98.5% | 79.5% |
| 4975339 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.70 | 60.0 | 5.43e-01 | 99.5% | 68.8% |
| 1230913 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.69 | 59.0 | 5.98e-01 | 100.0% | 91.1% |
| 5032659 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.68 | 58.0 | 5.16e-01 | 100.0% | 64.8% |
| 3471628 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.68 | 65.0 | 5.82e-01 | 100.0% | 75.4% |
| 5005192 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.67 | 59.0 | 5.32e-01 | 100.0% | 70.8% |
| 5072956 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.67 | 57.0 | 5.19e-01 | 100.0% | 69.2% |
| 5012613 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 55.0 | 5.09e-01 | 99.5% | 69.0% |
| 5003678 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.66 | 61.0 | 5.41e-01 | 100.0% | 71.2% |
| 3575142 | 2004.1.1.21 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RecA | 0.64 | 55.0 | 5.14e-01 | 100.0% | 73.6% |
| 5066468 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.64 | 58.0 | 5.20e-01 | 99.5% | 70.2% |
| 3579390 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.64 | 49.0 | 5.49e-01 | 98.5% | 100.0% |
| 3607207 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 60.0 | 4.90e-01 | 100.0% | 61.5% |
| 4946723 | 7592.1.1.13 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csm6_6H | 0.56 | 36.0 | 4.09e-01 | 99.5% | 83.3% |
| 3942393 | 2004.1.1.173 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TrwB_AAD_bind | 0.54 | 48.0 | 3.65e-01 | 95.4% | 67.8% |
| 3960390 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.51 | 37.0 | 4.10e-01 | 97.9% | 96.7% |
D2
medium
residues 30-116
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 51.0 | 5.15e-01 | 72.4% | 76.5% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.70 | 49.0 | 4.95e-01 | 72.4% | 81.2% |
| 2d2sA02 | 1.20.58.1220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain | 0.69 | 45.0 | 4.27e-01 | 73.6% | 56.4% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.68 | 48.0 | 5.17e-01 | 74.7% | 90.5% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.66 | 45.0 | 4.37e-01 | 70.1% | 63.3% |
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.65 | 44.0 | 3.76e-01 | 72.4% | 43.3% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 31.0 | 3.57e-01 | 74.7% | 63.6% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.60 | 42.0 | 4.14e-01 | 73.6% | 66.0% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 38.0 | 3.43e-01 | 70.1% | 45.3% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.58 | 40.0 | 4.02e-01 | 71.3% | 74.7% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 40.0 | 3.40e-01 | 74.7% | 96.7% |
| 3hjeA03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.53 | 34.0 | 3.36e-01 | 70.1% | 61.5% |
| 4l8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 36.0 | 3.43e-01 | 75.9% | 56.4% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 37.0 | 4.12e-01 | 74.7% | 97.0% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 36.0 | 3.26e-01 | 74.7% | 76.6% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.50 | 34.0 | 3.68e-01 | 70.1% | 87.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5010354 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.73 | 50.0 | 5.19e-01 | 71.3% | 83.7% |
| 4964132 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.72 | 53.0 | 5.04e-01 | 79.3% | 76.2% |
| 4930860 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.70 | 53.0 | 5.28e-01 | 80.5% | 91.1% |
| 3297600 | 621.1.1.7 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › EMC6 | 0.70 | 49.0 | 4.72e-01 | 75.9% | 64.0% |
| 3290433 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.69 | 51.0 | 5.04e-01 | 78.2% | 83.3% |
| 144301 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.69 | 47.0 | 5.04e-01 | 71.3% | 86.3% |
| 3202880 | 5076.2.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › EI24 | 0.63 | 55.0 | 4.02e-01 | 97.7% | 90.0% |
| 3602776 | 605.6.1.12 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like › PF27273 | 0.62 | 42.0 | 4.44e-01 | 71.3% | 92.5% |
| 3713780 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 41.0 | 3.64e-01 | 70.1% | 47.2% |
| 3486385 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.61 | 42.0 | 3.94e-01 | 71.3% | 66.7% |
| 5030358 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.57 | 45.0 | 3.18e-01 | 83.9% | 57.3% |
| 3596652 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.54 | 37.0 | 3.40e-01 | 82.8% | 50.4% |
| 5082714 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.54 | 38.0 | 3.25e-01 | 72.4% | 57.9% |
| 3593528 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 35.0 | 3.03e-01 | 70.1% | 90.7% |