EFP_LD130

Euk-Vir

Lymantria_xylina_nucleopolyhedrovirus

EFP_LD130__YP_003517866__Lymantria_xylina_nucleopolyhedrovirus__166921

Identity

69.0 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lymantria_xylina_nucleopolyhedrovirus

TaxID: 166921

View cluster (44 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-124_160-273

PDB

Domain cluster: rep: F_protein__YP_009165735__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D49-139_173-272

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	139.5	2.20e-40	62.4%	18.9%
PF12259.14	Baculo_F	53.2	2.90e-14	39.7%	11.8%

D2 medium residues 27-49_274-320_363-384

PDB

Domain cluster: rep: F_protein__YP_002854744__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D45-56_273-336_377-398

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	51.9	7.00e-14	53.3%	7.2%
PF12259.14	Baculo_F	29.2	5.40e-07	28.3%	4.1%

D3 medium residues 321-362_385-419_513-546

PDB

Domain cluster: rep: envelope_fusion_protein__YP_009345747__Mythimna_unipuncta_granulovirus_B__2169746__D27-50_306-403_477-502

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	65.9	4.10e-18	41.4%	7.2%
PF12259.14	Baculo_F	30.7	1.90e-07	33.3%	5.4%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3mzkB01	6.20.50.30	Special › Other non-globular › N-terminal domain of TfIIb ›	0.68	22.0	3.66e-01	74.8%	81.6%
3mcbB00	2.20.70.30	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain	0.59	28.0	3.72e-01	80.2%	86.2%
1ybyA02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.52	27.0	3.27e-01	91.0%	79.7%
2rdgA02	2.40.50.110	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.52	27.0	3.27e-01	94.6%	77.5%
3ovcA01	3.30.200.150	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 ›	0.51	25.0	3.02e-01	91.0%	70.4%
1fnuA01	2.40.50.110	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.50	27.0	3.02e-01	95.5%	67.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3407194	5093.1.1.2 ↗	a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Baculo_F	0.68	55.0	3.64e-01	83.8%	24.6%
5024072	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.59	28.0	2.94e-01	91.0%	46.7%
3352682	331.4.1.0 ↗	a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1	0.57	27.0	3.30e-01	91.0%	70.0%
4994359	3124.1.1.1 ↗	beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC	0.55	24.0	3.47e-01	76.6%	90.0%
3472467	284.1.3.0 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain	0.55	29.0	3.42e-01	90.1%	72.0%
3948516	2.1.1.10 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP	0.54	28.0	3.43e-01	91.9%	81.5%
2628565	5.1.3.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed	0.54	21.0	3.03e-01	72.1%	87.5%
3288890	243.1.1.0 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like	0.51	27.0	2.60e-01	91.0%	43.1%

D4 medium residues 420-512

PDB

Domain cluster: rep: fusion_protein__YP_009117053__Pseudoplusia_includens_SNPV_IE__1592335__D24-36_422-482

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12259.14 best	Baculo_F	92.3	4.20e-26	100.0%	14.4%