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EGF-like_domain

Euk-Vir

Mollivirus_sibericum_Viruses.

EGF-like_domain__YP_009165132__Mollivirus_sibericum_Viruses.__X

Identity

Accession:
YP_009165132 ↗
Protein ID:
EGF-like_domain
Kingdom:
euk

Quality

70.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 65-108_131-204
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.77 48.0 5.78e-01 100.0% 96.1%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.74 69.0 6.42e-01 100.0% 93.8%
3f9sB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 68.0 6.33e-01 100.0% 92.2%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 68.0 6.29e-01 100.0% 88.9%
1idpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 67.0 6.17e-01 100.0% 95.2%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.72 66.0 6.33e-01 98.3% 100.0%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 67.0 6.23e-01 100.0% 91.5%
4jf8A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.72 66.0 6.17e-01 99.2% 93.8%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 66.0 6.11e-01 100.0% 91.2%
3a76A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 67.0 6.29e-01 100.0% 91.4%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 67.0 6.39e-01 100.0% 94.7%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.71 66.0 6.27e-01 100.0% 95.7%
5i97C00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.71 65.0 6.16e-01 98.3% 100.0%
2gexA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 66.0 6.08e-01 100.0% 84.9%
4lgqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 65.0 6.25e-01 99.2% 94.7%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 65.0 6.09e-01 100.0% 92.2%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 64.0 5.71e-01 100.0% 77.4%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 65.0 6.07e-01 100.0% 90.1%
3ef8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 64.0 5.90e-01 100.0% 85.8%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 64.0 6.05e-01 100.0% 96.4%
3ehcB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 63.0 6.18e-01 100.0% 93.8%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 62.0 5.34e-01 100.0% 83.9%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.67 50.0 4.41e-01 100.0% 54.1%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 61.0 5.66e-01 100.0% 93.2%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 62.0 5.62e-01 100.0% 82.5%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 61.0 5.50e-01 100.0% 82.4%
1eq6A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.66 45.0 3.83e-01 100.0% 43.4%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 59.0 5.79e-01 97.5% 95.3%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 60.0 5.86e-01 98.3% 96.1%
6hpvA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 43.0 4.99e-01 96.6% 92.9%
3gzrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 60.0 5.66e-01 100.0% 91.5%
3cu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 61.0 5.43e-01 100.0% 79.6%
3f7sA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 61.0 5.68e-01 100.0% 93.0%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.65 56.0 5.84e-01 94.9% 100.0%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 60.0 5.28e-01 100.0% 90.6%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 59.0 5.80e-01 100.0% 96.9%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 60.0 5.19e-01 100.0% 89.3%
2rgqB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 60.0 5.80e-01 100.0% 92.5%
2bmoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 59.0 4.98e-01 100.0% 80.4%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 60.0 5.90e-01 100.0% 94.4%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 59.0 5.55e-01 100.0% 88.7%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 58.0 5.83e-01 99.2% 100.0%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 56.0 5.63e-01 97.5% 100.0%
3nv0B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 57.0 5.43e-01 99.2% 89.7%
4i4kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 56.0 5.36e-01 100.0% 92.0%
3ebyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 55.0 5.10e-01 100.0% 92.2%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 56.0 5.46e-01 100.0% 91.5%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 53.0 5.13e-01 99.2% 100.0%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 54.0 5.10e-01 100.0% 93.5%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.56 52.0 4.41e-01 100.0% 67.7%
4q52A00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.53 41.0 3.63e-01 82.2% 100.0%
1w7cA03 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 4.21e-01 100.0% 86.1%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.65e-01 100.0% 67.7%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.52 46.0 3.98e-01 100.0% 66.8%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.51 45.0 4.11e-01 96.6% 76.1%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.50 32.0 3.07e-01 95.8% 53.2%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3696424 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.73 68.0 6.26e-01 100.0% 88.7%
3950026 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 67.0 6.40e-01 99.2% 92.5%
3959230 243.1.1.77 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 0.72 65.0 6.14e-01 96.6% 87.1%
3288890 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 64.0 6.21e-01 94.9% 92.3%
3961898 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 64.0 6.23e-01 94.9% 92.3%
4352488 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.72 67.0 6.15e-01 100.0% 94.0%
3962922 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 66.0 5.89e-01 100.0% 77.0%
3951229 243.1.1.77 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 0.71 64.0 5.95e-01 97.5% 82.3%
3818687 243.1.1.49 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.71 66.0 6.11e-01 100.0% 91.0%
3958465 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.71 63.0 5.75e-01 94.9% 80.0%
4022303 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.71 66.0 6.03e-01 100.0% 83.3%
5072383 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.70 65.0 6.08e-01 100.0% 87.6%
1146680 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.70 66.0 6.10e-01 100.0% 95.1%
3216011 243.1.1.109 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382, DUF5382_C 0.70 64.0 4.71e-01 99.2% 44.4%
5010039 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.70 65.0 5.95e-01 100.0% 87.3%
6410 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.70 65.0 6.04e-01 100.0% 90.3%
3284019 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.70 65.0 6.17e-01 100.0% 94.1%
4106765 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.69 64.0 6.24e-01 100.0% 93.8%
5026021 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.69 64.0 6.03e-01 100.0% 97.1%
3479831 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.69 64.0 5.64e-01 100.0% 79.4%
3727006 243.1.1.9 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF1348 0.69 64.0 5.66e-01 100.0% 73.8%
3967916 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.69 64.0 5.90e-01 100.0% 89.9%
3282685 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.69 61.0 6.12e-01 95.8% 100.0%
4135737 243.1.1.66 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TcaA_5th 0.69 61.0 6.20e-01 95.8% 99.1%
3285746 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.69 64.0 5.80e-01 100.0% 80.6%
3848773 243.1.1.13 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.68 63.0 5.59e-01 99.2% 77.6%
3287787 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.68 63.0 5.92e-01 99.2% 95.0%
4283272 243.1.1.1 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.68 63.0 5.53e-01 100.0% 85.9%
3504070 243.1.1.13 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.68 62.0 5.77e-01 99.2% 89.7%
5009713 243.1.1.1 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.67 62.0 5.58e-01 100.0% 93.8%
4315252 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.67 61.0 5.74e-01 100.0% 89.7%
3893447 243.1.1.40 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.67 62.0 5.21e-01 100.0% 80.5%
4974050 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.67 62.0 5.93e-01 100.0% 94.1%
3287136 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.67 62.0 5.98e-01 99.2% 97.7%
6407 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.67 62.0 5.63e-01 100.0% 83.0%
3947325 243.1.1.56 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2895 0.67 61.0 5.71e-01 100.0% 98.6%
3279484 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.67 60.0 5.80e-01 100.0% 95.6%
6402 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.66 61.0 5.42e-01 100.0% 78.4%
3277859 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.66 61.0 5.95e-01 99.2% 96.9%
4664562 243.1.1.1 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.66 61.0 5.29e-01 100.0% 88.6%
3288819 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.66 60.0 5.58e-01 100.0% 91.3%
361002 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.66 60.0 5.84e-01 98.3% 95.3%
134562 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.66 60.0 5.64e-01 100.0% 90.2%
6409 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.66 61.0 5.43e-01 100.0% 79.6%
2632036 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.66 61.0 5.75e-01 100.0% 94.2%
3285905 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.66 58.0 5.61e-01 95.8% 91.5%
163051 243.1.1.1 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.65 60.0 5.28e-01 100.0% 90.6%
3277986 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.65 60.0 5.88e-01 100.0% 94.6%
6401 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.65 61.0 5.83e-01 100.0% 92.5%
1684828 243.1.1.67 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C 0.65 58.0 5.65e-01 94.9% 92.9%
3962910 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 60.0 5.72e-01 100.0% 97.0%
139114 243.1.1.1 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.65 59.0 5.07e-01 100.0% 84.9%
5047377 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.64 59.0 5.57e-01 99.2% 97.9%
134734 243.1.1.13 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.64 59.0 5.55e-01 100.0% 88.7%
2628859 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.64 59.0 5.68e-01 100.0% 98.5%
154434 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.62 56.0 5.36e-01 100.0% 92.0%
3961200 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.62 56.0 5.36e-01 100.0% 88.9%
3216464 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.61 56.0 5.51e-01 100.0% 98.4%
3286225 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.60 55.0 5.33e-01 100.0% 98.5%
1125573 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.60 55.0 5.33e-01 100.0% 98.4%
3722444 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.60 54.0 4.72e-01 100.0% 75.0%
3859609 243.1.1.40 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.59 53.0 4.56e-01 100.0% 87.4%
3725346 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.56 46.0 4.51e-01 88.1% 83.1%
3465790 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.54 49.0 4.03e-01 99.2% 81.9%
3173251 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.53 46.0 4.05e-01 100.0% 65.3%
3936550 883.1.1.2 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.53 48.0 3.16e-01 100.0% 25.8%
3718042 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.53 47.0 3.22e-01 100.0% 34.7%
3749143 243.3.1.20 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 0.52 44.0 4.38e-01 99.2% 88.0%
3584293 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.52 47.0 3.67e-01 100.0% 56.5%
3594616 1100.1.1.0 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein 0.52 40.0 3.23e-01 100.0% 40.4%
3441483 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.52 46.0 3.30e-01 100.0% 35.9%
3735831 9.1.1.37 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 0.51 43.0 3.68e-01 99.2% 55.0%
3843944 243.5.1.7 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 0.51 43.0 4.29e-01 99.2% 88.0%
3917010 243.3.1.20 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 0.51 43.0 4.28e-01 100.0% 88.8%
D2 high residues 211-297
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF28386.1 best BfoA_C 43.3 6.40e-11 93.1% 60.0%