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ENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00037

Bact-Vir

ENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00037

Identity

Kingdom:
phage

Quality

80.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-146
PDB
D2 high residues 150-246
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.69 24.0 3.34e-01 87.6% 60.8%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 32.0 3.65e-01 85.6% 64.3%
1s3iA02 3.10.25.10 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain 0.60 47.0 4.68e-01 92.8% 81.4%
1w9pA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 29.0 3.49e-01 86.6% 71.4%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 29.0 3.35e-01 78.4% 73.3%
3tqqA02 3.10.25.10 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain 0.54 39.0 3.79e-01 92.8% 68.9%
1gxrA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 38.0 2.71e-01 76.3% 86.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 27.0 3.12e-01 77.3% 65.7%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 34.0 3.58e-01 99.0% 74.7%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.51 26.0 2.22e-01 100.0% 29.3%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 28.0 3.17e-01 78.4% 73.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022991 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.69 34.0 3.55e-01 76.3% 50.0%
3568983 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 45.0 2.86e-01 76.3% 88.3%
3777739 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 43.0 2.90e-01 75.3% 85.1%
3399971 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 43.0 2.89e-01 76.3% 89.7%
4981525 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.57 35.0 3.84e-01 71.1% 75.9%
3211708 145.1.1.30 alpha arrays › F-box domain › F-box domain › F-box domain › FBA_2 0.57 44.0 3.18e-01 81.4% 57.8%
3401459 270.1.1.2 beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.55 41.0 4.01e-01 93.8% 70.0%
1308167 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.54 39.0 2.82e-01 76.3% 84.8%
4780493 3293.1.1.1 beta barrels › LARA domain › LARA domain › LARA domain › LARA_dom 0.54 35.0 3.90e-01 94.8% 85.1%
4944335 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 36.0 3.70e-01 75.3% 71.0%
3769766 270.1.1.2 beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.53 41.0 3.92e-01 92.8% 69.2%
4929392 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.53 36.0 3.79e-01 74.2% 76.7%
3318571 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 36.0 2.37e-01 71.1% 32.1%
5025229 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.52 36.0 3.28e-01 72.2% 81.2%
3594856 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 34.0 3.28e-01 83.5% 59.1%
3681173 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.51 44.0 2.89e-01 94.8% 72.8%
3711004 77.3.1.1 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C 0.51 28.0 2.55e-01 97.9% 40.8%
3258651 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 45.0 2.92e-01 100.0% 22.0%
4947316 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.50 35.0 3.13e-01 72.2% 85.0%