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ENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00199
Bact-VirENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00199
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-169
Domain cluster:
rep: OL774570.1__UIS74268.1__pA_gene0053__00053__D22-163
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.86 | 55.0 | 6.47e-01 | 95.2% | 89.2% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.84 | 53.0 | 6.15e-01 | 93.4% | 85.5% |
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.83 | 53.0 | 6.25e-01 | 94.0% | 89.9% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.82 | 42.0 | 5.54e-01 | 74.7% | 87.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.81 | 42.0 | 5.61e-01 | 74.1% | 92.3% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.76 | 44.0 | 5.58e-01 | 74.7% | 94.0% |
| 3ieyA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 42.0 | 5.39e-01 | 74.1% | 97.0% |
| 1rznA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.69 | 53.0 | 5.59e-01 | 95.8% | 87.3% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 46.0 | 5.14e-01 | 94.6% | 87.2% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.66 | 51.0 | 4.59e-01 | 79.5% | 68.5% |
| 4esjA01 | 3.40.210.30 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain | 0.62 | 52.0 | 5.33e-01 | 100.0% | 94.2% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 50.0 | 5.19e-01 | 94.6% | 96.7% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.59 | 35.0 | 3.75e-01 | 95.8% | 68.1% |
| 3ieyB00 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 40.0 | 4.18e-01 | 80.1% | 77.0% |
| 2ixsA02 | 3.40.1350.80 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › BsuBI/PstI restriction endonuclease, C-terminal domain | 0.56 | 44.0 | 4.49e-01 | 95.8% | 83.3% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 29.0 | 3.63e-01 | 83.7% | 81.0% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.56 | 45.0 | 4.73e-01 | 100.0% | 96.6% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.55 | 46.0 | 4.54e-01 | 100.0% | 84.0% |
| 1xmxA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.51 | 38.0 | 4.05e-01 | 94.0% | 88.7% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.51 | 44.0 | 4.27e-01 | 98.8% | 83.7% |
| 2ph7A02 | 3.40.50.10670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain | 0.51 | 30.0 | 3.75e-01 | 88.0% | 99.0% |
| 1o9yC00 | 2.30.330.10 | Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like | 0.51 | 22.0 | 3.15e-01 | 94.6% | 88.9% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036502 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.87 | 55.0 | 6.92e-01 | 92.2% | 100.0% |
| 5066412 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.85 | 57.0 | 6.71e-01 | 94.6% | 94.2% |
| 4384457 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.85 | 58.0 | 6.54e-01 | 93.4% | 88.5% |
| 5028193 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.84 | 59.0 | 6.75e-01 | 94.6% | 94.4% |
| 4260673 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.84 | 59.0 | 6.45e-01 | 95.2% | 85.6% |
| 4524608 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.83 | 59.0 | 6.69e-01 | 95.2% | 93.1% |
| 4956648 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.82 | 59.0 | 6.58e-01 | 95.2% | 90.4% |
| 3602325 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.82 | 56.0 | 6.47e-01 | 94.6% | 92.0% |
| 4942264 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.82 | 58.0 | 6.65e-01 | 94.6% | 95.2% |
| 4946143 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.82 | 61.0 | 6.73e-01 | 95.2% | 93.3% |
| 4940109 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.82 | 57.0 | 6.64e-01 | 95.2% | 95.9% |
| 4977491 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.82 | 57.0 | 6.52e-01 | 92.2% | 93.6% |
| 4149106 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.82 | 56.0 | 6.15e-01 | 95.2% | 84.4% |
| 4957206 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.81 | 60.0 | 6.64e-01 | 95.2% | 92.6% |
| 4948823 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.81 | 56.0 | 6.42e-01 | 91.0% | 93.5% |
| 4160601 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.80 | 52.0 | 6.15e-01 | 92.8% | 93.0% |
| 4991180 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.79 | 55.0 | 6.19e-01 | 95.2% | 90.0% |
| 3249181 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.79 | 44.0 | 5.86e-01 | 73.5% | 100.0% |
| 3625561 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.79 | 45.0 | 5.78e-01 | 75.3% | 94.0% |
| 5057784 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 45.0 | 5.90e-01 | 72.3% | 100.0% |
| 5024223 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.78 | 57.0 | 6.24e-01 | 94.6% | 89.9% |
| 5013988 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.77 | 53.0 | 5.98e-01 | 91.0% | 89.2% |
| 5016968 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 54.0 | 6.00e-01 | 94.6% | 89.6% |
| 5019662 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 59.0 | 6.08e-01 | 95.2% | 84.5% |
| 5004848 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 60.0 | 6.55e-01 | 94.6% | 97.1% |
| 5037144 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 44.0 | 5.07e-01 | 93.4% | 77.4% |
| 5067597 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.73 | 41.0 | 5.02e-01 | 93.4% | 83.6% |
| 5004127 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 51.0 | 5.22e-01 | 94.6% | 77.5% |
| 4331456 | 2008.1.1.187 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_AccI | 0.69 | 62.0 | 5.67e-01 | 94.6% | 87.6% |
| 4534629 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.69 | 48.0 | 5.58e-01 | 75.9% | 98.3% |
| 4284406 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.67 | 55.0 | 5.60e-01 | 97.6% | 88.1% |
| 4489860 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.67 | 56.0 | 5.62e-01 | 97.0% | 87.9% |
| 3839971 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 62.0 | 5.69e-01 | 100.0% | 88.1% |
| 3597341 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 50.0 | 3.87e-01 | 79.5% | 67.2% |
| 5000381 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.64 | 45.0 | 5.13e-01 | 100.0% | 94.4% |
| 4293420 | 2008.1.1.13 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecU | 0.64 | 56.0 | 5.28e-01 | 100.0% | 77.5% |
| 5013306 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 51.0 | 5.31e-01 | 92.8% | 90.3% |
| 4942551 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.62 | 51.0 | 4.64e-01 | 87.3% | 71.4% |
| 3955210 | 2008.1.1.60 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat_2 | 0.61 | 49.0 | 5.00e-01 | 100.0% | 84.2% |
| 4927134 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.61 | 53.0 | 5.50e-01 | 95.2% | 98.7% |
| 4944368 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.61 | 52.0 | 5.37e-01 | 95.2% | 96.8% |
| 4965617 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.60 | 39.0 | 4.37e-01 | 94.0% | 83.8% |
| 3280651 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 56.0 | 4.95e-01 | 100.0% | 74.3% |
| 4937744 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 41.0 | 4.72e-01 | 94.6% | 96.7% |
| 4289957 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 47.0 | 2.84e-01 | 88.6% | 28.2% |
| 4519331 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.56 | 46.0 | 3.58e-01 | 88.6% | 82.9% |
| 4115308 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.56 | 49.0 | 5.03e-01 | 94.0% | 96.9% |
| 2665335 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.56 | 29.0 | 3.12e-01 | 83.7% | 55.4% |
| 3480310 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 47.0 | 4.22e-01 | 88.6% | 68.0% |
| 4200537 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 49.0 | 3.36e-01 | 94.0% | 50.7% |
| 5014475 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 44.0 | 4.71e-01 | 99.4% | 98.6% |
| 4617209 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.54 | 49.0 | 4.27e-01 | 100.0% | 85.5% |
| 4579488 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.53 | 46.0 | 3.65e-01 | 92.8% | 80.0% |
| 4597944 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 46.0 | 3.64e-01 | 92.8% | 80.0% |
| 4458331 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.53 | 30.0 | 2.67e-01 | 86.1% | 38.7% |
| 3622133 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.52 | 30.0 | 2.67e-01 | 84.9% | 36.8% |
| 3991601 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.52 | 30.0 | 3.09e-01 | 84.9% | 57.9% |
| 4999713 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 43.0 | 4.27e-01 | 94.0% | 83.4% |
| 5082297 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 37.0 | 3.73e-01 | 94.0% | 72.7% |
| 4968793 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 45.0 | 4.50e-01 | 93.4% | 97.1% |
| 3818045 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.51 | 38.0 | 3.30e-01 | 75.3% | 64.4% |
| 4947743 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.51 | 36.0 | 3.61e-01 | 94.0% | 69.4% |
| 5065022 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.51 | 47.0 | 4.32e-01 | 100.0% | 86.5% |
| 3971942 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.51 | 28.0 | 2.70e-01 | 83.7% | 45.1% |
| 3603146 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.50 | 45.0 | 3.80e-01 | 98.2% | 93.3% |
| 4401609 | 2003.1.10.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Dala_Dala_lig_N | 0.50 | 33.0 | 3.62e-01 | 89.8% | 80.7% |
| 3217236 | 2007.9.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › MAP3K_TRAF_bd+DRHyd-ASK | 0.50 | 41.0 | 4.04e-01 | 94.6% | 80.6% |