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ENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00296
Bact-VirENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00296
Identity
- Kingdom:
- phage
Quality
87.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-112
Domain cluster:
rep: IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001137__D1-116
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ezhA00 | 1.20.120.960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase NarX, sensor domain | 0.60 | 43.0 | 4.02e-01 | 73.4% | 64.9% |
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 30.0 | 3.43e-01 | 73.4% | 62.5% |
| 2qvwC06 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.59 | 50.0 | 4.30e-01 | 95.7% | 84.3% |
| 1t90A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.58 | 48.0 | 3.50e-01 | 91.5% | 89.6% |
| 3pvuA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.58 | 38.0 | 4.04e-01 | 90.4% | 77.5% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 43.0 | 3.88e-01 | 83.0% | 96.3% |
| 2qz4A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 36.0 | 4.08e-01 | 73.4% | 88.4% |
| 4c0nA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 41.0 | 3.56e-01 | 77.7% | 91.3% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.54 | 41.0 | 4.07e-01 | 79.8% | 87.5% |
| 1hw1A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.54 | 45.0 | 3.96e-01 | 96.8% | 75.5% |
| 4fjvA02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.54 | 38.0 | 3.32e-01 | 73.4% | 56.2% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 36.0 | 3.60e-01 | 71.3% | 94.2% |
| 1ohuA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 37.0 | 3.09e-01 | 74.5% | 68.5% |
| 6kd7A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 44.0 | 3.08e-01 | 95.7% | 28.4% |
| 6w6vE01 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.51 | 40.0 | 3.44e-01 | 85.1% | 67.1% |
| 3k53A02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 32.0 | 3.18e-01 | 88.3% | 59.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3727157 | 611.7.1.0 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain | 0.66 | 46.0 | 4.21e-01 | 72.3% | 63.2% |
| 4527485 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.64 | 44.0 | 3.64e-01 | 85.1% | 38.9% |
| 3474812 | 529.1.1.2 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › BSMAP | 0.63 | 32.0 | 3.75e-01 | 78.7% | 69.2% |
| 3511777 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 43.0 | 3.39e-01 | 75.5% | 70.0% |
| 4512488 | 611.9.1.0 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain | 0.58 | 47.0 | 4.29e-01 | 91.5% | 92.6% |
| 3596183 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.57 | 39.0 | 4.31e-01 | 70.2% | 93.3% |
| 3348349 | 106.1.1.3 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Bac_globin | 0.57 | 42.0 | 3.59e-01 | 77.7% | 88.4% |
| 3178891 | 632.25.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › GBS CAMP factor N-terminal domain › GBS CAMP factor N-terminal domain › NACHT_N | 0.57 | 46.0 | 3.47e-01 | 88.3% | 93.2% |
| 3226186 | 101.1.10.4 ↗ | alpha arrays › HTH › HTH › Cyclin-like › RB_B | 0.57 | 43.0 | 3.63e-01 | 83.0% | 89.4% |
| 4171296 | 1198.1.1.1 ↗ | alpha bundles › BTA121 › BTA121 › BTA121 › Mlp | 0.57 | 40.0 | 4.03e-01 | 73.4% | 76.3% |
| 3483338 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.57 | 38.0 | 3.69e-01 | 71.3% | 61.0% |
| 4386395 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.55 | 34.0 | 3.37e-01 | 81.9% | 56.0% |
| 3600974 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.54 | 39.0 | 3.68e-01 | 77.7% | 67.5% |
| 3714253 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.52 | 39.0 | 3.60e-01 | 81.9% | 70.4% |
| 4428576 | 5067.1.1.2 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF | 0.51 | 41.0 | 3.25e-01 | 88.3% | 87.3% |
| 4133868 | 6102.1.1.1 ↗ | alpha arrays › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › SMC_ScpA | 0.51 | 38.0 | 3.22e-01 | 78.7% | 59.4% |
| 3696447 | 102.1.4.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain | 0.50 | 40.0 | 3.42e-01 | 89.4% | 74.5% |
D2
high
residues 122-228
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sziA02 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.79 | 47.0 | 4.23e-01 | 100.0% | 46.7% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.74 | 40.0 | 4.12e-01 | 100.0% | 54.4% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 54.0 | 5.32e-01 | 88.8% | 73.0% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 51.0 | 5.52e-01 | 73.8% | 95.6% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 49.0 | 5.59e-01 | 90.7% | 95.1% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.67 | 54.0 | 5.24e-01 | 84.1% | 84.0% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 40.0 | 3.96e-01 | 96.3% | 57.0% |
| 3chxC00 | 1.20.1050.50 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Particulate methane monooxygenase subunit c2. Chain: C | 0.66 | 60.0 | 5.25e-01 | 100.0% | 94.3% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.66 | 53.0 | 5.10e-01 | 84.1% | 78.2% |
| 2p61A00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.64 | 38.0 | 3.81e-01 | 92.5% | 55.3% |
| 6pnjL00 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.64 | 49.0 | 4.31e-01 | 81.3% | 72.4% |
| 8a3tD01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 45.0 | 3.17e-01 | 94.4% | 22.1% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.61 | 51.0 | 5.04e-01 | 87.9% | 91.2% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 47.0 | 4.53e-01 | 82.2% | 72.9% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 45.0 | 4.75e-01 | 79.4% | 96.9% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 53.0 | 4.42e-01 | 93.5% | 73.1% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.60 | 46.0 | 4.81e-01 | 87.9% | 87.8% |
| 1quuA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 47.0 | 4.46e-01 | 88.8% | 72.2% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.59 | 44.0 | 4.40e-01 | 79.4% | 93.8% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 44.0 | 4.42e-01 | 79.4% | 94.5% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.58 | 44.0 | 4.40e-01 | 79.4% | 93.6% |
| 2x6hA03 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.57 | 50.0 | 4.15e-01 | 99.1% | 80.5% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.57 | 47.0 | 4.12e-01 | 90.7% | 87.2% |
| 4in3B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 53.0 | 3.23e-01 | 100.0% | 29.5% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.56 | 43.0 | 4.18e-01 | 79.4% | 93.2% |
| 1at9A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 46.0 | 3.63e-01 | 89.7% | 50.4% |
| 1gu9C00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 41.0 | 3.60e-01 | 98.1% | 50.6% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 42.0 | 3.94e-01 | 80.4% | 74.4% |
| 6jpaE00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.55 | 46.0 | 3.92e-01 | 89.7% | 87.0% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 48.0 | 4.31e-01 | 99.1% | 85.7% |
| 1rcwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.55 | 47.0 | 3.71e-01 | 92.5% | 65.0% |
| 1xioA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 45.0 | 3.63e-01 | 91.6% | 53.9% |
| 5i1uA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 45.0 | 3.28e-01 | 90.7% | 46.3% |
| 7q37A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 44.0 | 3.51e-01 | 88.8% | 53.3% |
| 3chtA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.53 | 45.0 | 3.26e-01 | 93.5% | 46.2% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3848998 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.76 | 51.0 | 6.01e-01 | 100.0% | 93.7% |
| 3727478 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.76 | 62.0 | 6.17e-01 | 94.4% | 84.5% |
| 3179188 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.75 | 53.0 | 4.95e-01 | 72.9% | 63.8% |
| 3612492 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 64.0 | 5.06e-01 | 92.5% | 57.1% |
| 3171899 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.74 | 60.0 | 5.06e-01 | 85.0% | 65.3% |
| 4021626 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.73 | 44.0 | 3.87e-01 | 100.0% | 43.3% |
| 4159391 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.71 | 53.0 | 5.60e-01 | 79.4% | 86.3% |
| 3463576 | 3684.1.1.2 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 | 0.68 | 58.0 | 4.51e-01 | 90.7% | 92.7% |
| 3806304 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.68 | 52.0 | 4.35e-01 | 79.4% | 58.9% |
| 4019453 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.67 | 49.0 | 3.68e-01 | 75.7% | 36.8% |
| 3578428 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.67 | 49.0 | 4.44e-01 | 76.6% | 71.0% |
| 3575005 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 56.0 | 4.88e-01 | 89.7% | 78.1% |
| 3207001 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.66 | 56.0 | 5.05e-01 | 88.8% | 82.1% |
| 3622094 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 55.0 | 4.77e-01 | 86.9% | 75.5% |
| 4658843 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.66 | 50.0 | 3.76e-01 | 80.4% | 81.9% |
| 3580282 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 50.0 | 4.85e-01 | 84.1% | 72.5% |
| 3242228 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.64 | 55.0 | 5.35e-01 | 92.5% | 87.5% |
| 4028809 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.64 | 54.0 | 5.03e-01 | 88.8% | 86.2% |
| 3187449 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.63 | 52.0 | 4.63e-01 | 86.9% | 77.9% |
| 4995305 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.63 | 48.0 | 5.05e-01 | 87.9% | 89.5% |
| 3915562 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 51.0 | 4.97e-01 | 85.0% | 81.7% |
| 5027312 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.62 | 50.0 | 5.18e-01 | 88.8% | 88.3% |
| 3927056 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.62 | 54.0 | 4.36e-01 | 97.2% | 82.9% |
| 4870707 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.62 | 53.0 | 4.07e-01 | 91.6% | 70.3% |
| 3213348 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.61 | 52.0 | 4.79e-01 | 89.7% | 87.4% |
| 3239865 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.61 | 52.0 | 4.76e-01 | 89.7% | 88.1% |
| 3797620 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.61 | 45.0 | 3.69e-01 | 77.6% | 55.4% |
| 3919843 | 604.1.1.124 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 | 0.61 | 47.0 | 4.39e-01 | 81.3% | 83.1% |
| 3442053 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.60 | 42.0 | 3.47e-01 | 72.9% | 69.5% |
| 4484289 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.60 | 49.0 | 4.04e-01 | 86.9% | 90.0% |
| 5001558 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.60 | 49.0 | 4.00e-01 | 86.9% | 93.8% |
| 3841582 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.60 | 48.0 | 4.28e-01 | 86.9% | 77.4% |
| 3222485 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.60 | 49.0 | 4.05e-01 | 86.9% | 82.2% |
| 3948847 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.59 | 44.0 | 4.59e-01 | 79.4% | 84.0% |
| 3185833 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.59 | 48.0 | 4.30e-01 | 87.9% | 76.7% |
| 3567382 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.59 | 45.0 | 4.43e-01 | 81.3% | 88.7% |
| 3321923 | 603.2.1.16 ↗ | alpha bundles › STAT-like › STAT › STAT › DUF3537 | 0.58 | 51.0 | 3.74e-01 | 98.1% | 82.4% |
| 3421660 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.58 | 48.0 | 4.14e-01 | 88.8% | 70.3% |
| 3172226 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.57 | 48.0 | 3.79e-01 | 96.3% | 78.4% |
| 5066783 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.57 | 47.0 | 4.11e-01 | 89.7% | 74.5% |
| 3244395 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.55 | 45.0 | 4.11e-01 | 88.8% | 75.9% |
| 4354686 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.54 | 42.0 | 4.06e-01 | 100.0% | 72.5% |
| 3509413 | 601.54.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 › UPF0220 | 0.54 | 42.0 | 3.87e-01 | 82.2% | 91.1% |
D3
high
residues 234-351
Domain cluster:
rep: PH2015_18_scaffold_2_prodigal-single.1__X__X__00488__D302-418
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 41.0 | 4.92e-01 | 99.2% | 92.0% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 41.0 | 4.87e-01 | 81.4% | 92.0% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 39.0 | 4.91e-01 | 100.0% | 98.5% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 40.0 | 4.88e-01 | 82.2% | 94.5% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 40.0 | 4.88e-01 | 99.2% | 97.2% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 38.0 | 4.62e-01 | 90.7% | 90.5% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 37.0 | 4.63e-01 | 99.2% | 100.0% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 40.0 | 4.62e-01 | 96.6% | 95.1% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 40.0 | 4.66e-01 | 100.0% | 98.7% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 4.12e-01 | 100.0% | 75.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3606838 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 40.0 | 4.40e-01 | 100.0% | 75.8% |
| 3401273 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.64 | 40.0 | 4.34e-01 | 99.2% | 75.8% |
| 3271407 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 39.0 | 4.52e-01 | 96.6% | 84.7% |
| 3277139 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 42.0 | 4.29e-01 | 100.0% | 68.7% |
| 3610074 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.62 | 41.0 | 4.25e-01 | 99.2% | 71.8% |
| 3626383 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.62 | 40.0 | 4.36e-01 | 98.3% | 80.0% |
| 3712189 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.61 | 41.0 | 4.62e-01 | 86.4% | 90.0% |
| 3820621 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.61 | 39.0 | 4.56e-01 | 100.0% | 93.8% |
| 4213062 | 3389.1.1.1 ↗ | a+b two layers › hypothetical protein SAV0303 › hypothetical protein SAV0303 › hypothetical protein SAV0303 › DUF4467 | 0.55 | 33.0 | 3.67e-01 | 75.4% | 73.7% |
| 3702167 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 41.0 | 4.15e-01 | 99.2% | 80.0% |
| 3187920 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 42.0 | 4.05e-01 | 100.0% | 70.7% |
| 4495979 | 270.1.1.1 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Pur_DNA_glyco | 0.53 | 39.0 | 3.30e-01 | 76.3% | 97.5% |
| 4284803 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.50 | 31.0 | 3.05e-01 | 96.6% | 56.8% |