←Back to structures

ENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00326

Bact-Vir

ENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00326

Identity

Kingdom:
phage

Quality

95.3 mean pLDDT

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-81
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 51.0 5.75e-01 72.5% 93.5%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 48.0 5.25e-01 72.5% 92.1%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 46.0 4.92e-01 73.8% 83.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 42.0 4.61e-01 73.8% 83.1%
2jneA00 2.10.290.10 Mainly Beta › Ribbon › Rubredoxin-like › YfgJ-like 0.64 34.0 3.61e-01 71.2% 56.3%
3bfmA02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 31.0 3.77e-01 81.2% 88.4%
1b3qA04 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.57 29.0 3.23e-01 96.2% 60.3%
2re3B03 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.55 23.0 3.35e-01 96.2% 100.0%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 30.0 3.63e-01 81.2% 91.5%
3u9sE04 3.30.700.40 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.53 40.0 3.50e-01 81.2% 78.4%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 37.0 2.53e-01 76.2% 86.0%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3958069 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.72 35.0 4.10e-01 90.0% 65.5%
3522910 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 48.0 5.00e-01 73.8% 80.0%
5033242 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.68 49.0 4.81e-01 82.5% 70.6%
3929201 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 28.0 3.51e-01 91.3% 63.3%
4989408 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 41.0 4.03e-01 73.8% 71.9%
5074749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 37.0 3.85e-01 88.7% 80.0%
3239076 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.53 34.0 4.13e-01 98.8% 98.2%
2388307 4.16.1.1 ↗ beta barrels › SH3 › PhtA domain-like › PhtA domain-like › Strep_his_triad 0.52 35.0 3.71e-01 71.2% 87.3%
3694580 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 36.0 2.39e-01 75.0% 89.0%
4081078 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.51 34.0 3.06e-01 82.5% 48.2%
3823449 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 36.0 2.53e-01 73.8% 83.8%
3903582 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 37.0 2.49e-01 78.8% 92.4%
3386489 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.51 35.0 2.79e-01 72.5% 36.5%
3636498 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 36.0 2.40e-01 75.0% 85.8%
4126797 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.50 33.0 3.67e-01 73.8% 91.7%