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ENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00341
Bact-VirENA-CEUD01013717-CEUD01013717-1_prodigal-single.1__X__X__00341
Identity
- Kingdom:
- phage
Quality
76.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-107
Domain cluster:
rep: MK893987.1__QDF14379.1__X__00082__D3-65
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.84 | 68.0 | 5.88e-01 | 89.0% | 58.5% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.60 | 45.0 | 3.71e-01 | 80.8% | 91.0% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.58 | 34.0 | 3.88e-01 | 74.0% | 82.4% |
| 5umbA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 48.0 | 3.65e-01 | 93.2% | 64.1% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.22e-01 | 98.6% | 86.2% |
| 3lnbA00 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.55 | 43.0 | 3.03e-01 | 86.3% | 49.6% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 38.0 | 3.28e-01 | 75.3% | 74.2% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.54 | 42.0 | 3.24e-01 | 83.6% | 50.0% |
| 1o97D01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 35.0 | 2.67e-01 | 82.2% | 26.5% |
| 2de6A02 | 2.20.25.680 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 35.0 | 3.86e-01 | 91.8% | 86.2% |
| 2f09A00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.53 | 43.0 | 4.16e-01 | 90.4% | 98.8% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.53 | 45.0 | 2.99e-01 | 100.0% | 99.1% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 35.0 | 3.83e-01 | 84.9% | 83.6% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.66e-01 | 86.3% | 74.6% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.52 | 36.0 | 3.57e-01 | 74.0% | 97.4% |
| 3iujA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.51 | 44.0 | 2.96e-01 | 100.0% | 99.7% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 38.0 | 3.18e-01 | 82.2% | 84.8% |
| 2im9A02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.51 | 44.0 | 3.59e-01 | 100.0% | 73.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4411726 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.60 | 41.0 | 4.37e-01 | 98.6% | 80.0% |
| 5074806 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.59 | 50.0 | 3.57e-01 | 97.3% | 87.8% |
| 4202291 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.57 | 42.0 | 4.33e-01 | 86.3% | 81.4% |
| 3405538 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.56 | 43.0 | 2.96e-01 | 86.3% | 53.9% |
| 4010681 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.56 | 43.0 | 3.91e-01 | 80.8% | 69.5% |
| 3281773 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.56 | 39.0 | 2.44e-01 | 74.0% | 11.5% |
| 5079015 | 2484.1.1.71 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter | 0.55 | 45.0 | 3.16e-01 | 90.4% | 46.9% |
| 4144799 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.55 | 34.0 | 3.46e-01 | 87.7% | 62.9% |
| 2534584 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.55 | 32.0 | 3.53e-01 | 78.1% | 73.7% |
| 3281271 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.54 | 41.0 | 3.85e-01 | 80.8% | 77.8% |
| 3929033 | 59.1.1.0 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like | 0.54 | 34.0 | 3.31e-01 | 76.7% | 55.0% |
| 3936327 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.54 | 38.0 | 3.41e-01 | 72.6% | 75.0% |
| 1007 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.54 | 28.0 | 3.51e-01 | 75.3% | 87.8% |
| 3185909 | 394.1.1.2 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_19 | 0.53 | 31.0 | 3.63e-01 | 78.1% | 84.0% |
| 3976843 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.53 | 42.0 | 4.04e-01 | 90.4% | 93.3% |
| 3700169 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.53 | 42.0 | 2.62e-01 | 89.0% | 18.2% |
| 3241311 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 40.0 | 3.05e-01 | 84.9% | 89.5% |
| 3234330 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 38.0 | 3.44e-01 | 80.8% | 65.5% |
| 3941210 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.52 | 38.0 | 3.49e-01 | 78.1% | 72.6% |
| 3743129 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 37.0 | 3.38e-01 | 79.5% | 74.3% |
| 3279470 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.50 | 37.0 | 3.54e-01 | 79.5% | 73.3% |
| 3485317 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 41.0 | 2.46e-01 | 91.8% | 34.0% |
| 3942668 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.50 | 39.0 | 3.54e-01 | 86.3% | 95.2% |
| 3594326 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.50 | 36.0 | 3.57e-01 | 78.1% | 92.5% |