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ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00046
Bact-VirERMGT119_2_scaffold_6_prodigal-single.1__X__X__00046
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-78
Domain cluster:
rep: IMGVR_UViG_3300006810_013543-3300006810-Ga0070754_1000302914__D6-75
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jfzA00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.62 | 45.0 | 3.63e-01 | 78.4% | 68.9% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.61 | 44.0 | 3.57e-01 | 78.4% | 77.0% |
| 2lwxA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.57 | 46.0 | 4.44e-01 | 90.5% | 79.5% |
| 3mk7C03 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.55 | 41.0 | 3.93e-01 | 81.1% | 80.2% |
| 3kheA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 38.0 | 3.40e-01 | 93.2% | 49.5% |
| 4oogC01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.53 | 42.0 | 3.34e-01 | 89.2% | 83.3% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.53 | 37.0 | 2.98e-01 | 74.3% | 73.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3459081 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 53.0 | 5.32e-01 | 90.5% | 100.0% |
| 3459466 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 52.0 | 5.11e-01 | 98.6% | 96.2% |
| 3596559 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 52.0 | 4.79e-01 | 100.0% | 98.0% |
| 3667656 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.60 | 53.0 | 3.57e-01 | 100.0% | 81.0% |
| 5055153 | 3290.1.1.0 ↗ | alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B | 0.60 | 38.0 | 3.72e-01 | 70.3% | 58.7% |
| 3241961 | 3361.1.1.1 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › RAC_head | 0.58 | 46.0 | 4.49e-01 | 90.5% | 82.4% |
| 3444517 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 48.0 | 3.86e-01 | 100.0% | 95.8% |
| 5043686 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 47.0 | 3.47e-01 | 91.9% | 56.5% |
| 4012343 | 4049.1.1.2 ↗ | alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › Sirohm_synth_C | 0.56 | 48.0 | 4.72e-01 | 97.3% | 90.0% |
| 3697157 | 101.1.10.22 ↗ | alpha arrays › HTH › HTH › Cyclin-like › ORC6 | 0.54 | 45.0 | 4.13e-01 | 94.6% | 94.0% |