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ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00175

Bact-Vir

ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00175

Identity

Kingdom:
phage

Quality

59.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-83
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wirA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.66 47.0 2.84e-01 75.0% 14.5%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 43.0 4.39e-01 75.0% 91.4%
6t0bc01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 44.0 4.11e-01 78.3% 61.5%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 40.0 3.56e-01 78.3% 59.8%
2oxaA01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.52 39.0 2.35e-01 80.0% 22.6%
1yy7A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.50 36.0 3.16e-01 80.0% 47.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3818350 109.4.1.210 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.74 46.0 2.95e-01 78.3% 14.3%
3329196 604.6.1.1 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.63 54.0 4.53e-01 95.0% 61.0%
4265951 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.54 34.0 3.07e-01 75.0% 42.2%
4947455 7512.1.1.48 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF3492 0.54 41.0 2.71e-01 81.7% 55.6%
5016327 605.1.1.2 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim 0.52 41.0 3.93e-01 90.0% 88.6%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.51 41.0 3.90e-01 88.3% 83.1%
3609299 304.110.1.7 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › TEX47 0.51 36.0 2.59e-01 76.7% 28.0%