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ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00215
Bact-VirERMGT119_2_scaffold_6_prodigal-single.1__X__X__00215
Identity
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-100
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fd7A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.71 | 53.0 | 3.59e-01 | 81.7% | 59.9% |
| 2bz0A00 | 3.40.50.10990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II | 0.67 | 49.0 | 3.60e-01 | 80.0% | 76.2% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 42.0 | 3.34e-01 | 70.0% | 34.7% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.61 | 45.0 | 4.33e-01 | 86.7% | 69.0% |
| 4fbcA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.60 | 45.0 | 3.28e-01 | 83.3% | 58.0% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.58 | 44.0 | 3.13e-01 | 85.0% | 33.0% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 43.0 | 3.74e-01 | 83.3% | 56.7% |
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.57 | 43.0 | 3.37e-01 | 83.3% | 94.2% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.57 | 43.0 | 4.25e-01 | 83.3% | 84.1% |
| 3i6eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 42.0 | 3.59e-01 | 81.7% | 100.0% |
| 7bj4A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 42.0 | 2.60e-01 | 81.7% | 21.2% |
| 1x05A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 44.0 | 3.53e-01 | 86.7% | 44.2% |
| 1so7A00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 44.0 | 2.77e-01 | 88.3% | 17.2% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.56 | 38.0 | 3.29e-01 | 75.0% | 42.2% |
| 1yuaA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 41.0 | 4.21e-01 | 83.3% | 84.5% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 43.0 | 4.07e-01 | 85.0% | 77.3% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 46.0 | 3.41e-01 | 91.7% | 91.7% |
| 3mkcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 41.0 | 3.19e-01 | 80.0% | 77.1% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 3.39e-01 | 88.3% | 37.6% |
| 4bwkB01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.56 | 42.0 | 2.76e-01 | 81.7% | 54.7% |
| 3lifB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 42.0 | 3.25e-01 | 85.0% | 86.1% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.55 | 41.0 | 3.36e-01 | 80.0% | 70.6% |
| 2b5uA03 | 3.10.380.10 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain | 0.55 | 42.0 | 3.62e-01 | 85.0% | 66.3% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 41.0 | 3.31e-01 | 83.3% | 64.5% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 37.0 | 3.13e-01 | 85.0% | 39.1% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 38.0 | 2.38e-01 | 73.3% | 78.8% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 39.0 | 3.93e-01 | 85.0% | 79.7% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 39.0 | 2.54e-01 | 85.0% | 14.9% |
| 3nqhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 41.0 | 2.65e-01 | 88.3% | 17.2% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 37.0 | 3.32e-01 | 76.7% | 71.4% |
| 3ff0A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 44.0 | 3.47e-01 | 100.0% | 56.0% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.52 | 44.0 | 3.53e-01 | 98.3% | 76.2% |
| 6kmoB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 43.0 | 2.78e-01 | 100.0% | 78.4% |
| 1y9lA00 | 2.40.128.230 | Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM | 0.51 | 39.0 | 3.20e-01 | 83.3% | 90.9% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4043920 | 7580.1.1.1 ↗ | a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 | 0.67 | 49.0 | 3.55e-01 | 80.0% | 64.6% |
| 3407758 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.65 | 50.0 | 4.12e-01 | 86.7% | 46.1% |
| 4988323 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.63 | 49.0 | 4.31e-01 | 85.0% | 84.4% |
| 3180857 | 11.1.1.193 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CDH-cyt | 0.63 | 44.0 | 3.10e-01 | 75.0% | 76.4% |
| 3602976 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 46.0 | 4.82e-01 | 81.7% | 94.5% |
| 3250819 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.62 | 50.0 | 3.84e-01 | 90.0% | 38.6% |
| 3935343 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.62 | 50.0 | 3.74e-01 | 91.7% | 38.8% |
| 4988502 | 375.1.1.298 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM | 0.62 | 43.0 | 4.68e-01 | 73.3% | 100.0% |
| 2774000 | 881.4.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › MucB_RseB_C | 0.62 | 50.0 | 4.21e-01 | 90.0% | 82.5% |
| 3057477 | 220.1.1.146 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N | 0.61 | 45.0 | 3.99e-01 | 80.0% | 57.1% |
| 3248668 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.61 | 42.0 | 3.83e-01 | 71.7% | 56.2% |
| 3164763 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.61 | 52.0 | 3.42e-01 | 95.0% | 40.8% |
| 3415886 | 220.1.1.146 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N | 0.61 | 42.0 | 3.74e-01 | 71.7% | 55.3% |
| 3888868 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 50.0 | 4.04e-01 | 93.3% | 48.3% |
| 5070387 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 48.0 | 4.56e-01 | 91.7% | 85.3% |
| 3497846 | 133.1.1.3 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › PH | 0.60 | 49.0 | 3.03e-01 | 93.3% | 16.4% |
| 3719349 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 47.0 | 2.85e-01 | 88.3% | 17.2% |
| 4994580 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 46.0 | 2.78e-01 | 88.3% | 13.7% |
| 4993469 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 48.0 | 4.40e-01 | 91.7% | 83.7% |
| 4928898 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 44.0 | 4.20e-01 | 86.7% | 73.3% |
| 3495596 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.58 | 40.0 | 2.74e-01 | 71.7% | 45.7% |
| 3938274 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.58 | 43.0 | 3.08e-01 | 83.3% | 65.9% |
| 3178227 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 44.0 | 2.80e-01 | 85.0% | 16.8% |
| 3411088 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.58 | 46.0 | 2.84e-01 | 88.3% | 14.3% |
| 3935202 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.58 | 40.0 | 3.28e-01 | 73.3% | 38.3% |
| 3396749 | 5.1.5.73 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N | 0.57 | 44.0 | 2.76e-01 | 90.0% | 14.5% |
| 5045706 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 44.0 | 4.30e-01 | 88.3% | 85.7% |
| 3536413 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 45.0 | 3.76e-01 | 88.3% | 50.9% |
| 3538471 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 46.0 | 3.74e-01 | 91.7% | 49.2% |
| 4461912 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 49.0 | 4.02e-01 | 98.3% | 88.2% |
| 3923512 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.56 | 41.0 | 3.33e-01 | 80.0% | 45.0% |
| 3271763 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 43.0 | 3.37e-01 | 90.0% | 40.7% |
| 3408648 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 39.0 | 3.31e-01 | 73.3% | 46.0% |
| 3517836 | 209.1.2.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like | 0.55 | 44.0 | 3.02e-01 | 91.7% | 89.9% |
| 3998402 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.55 | 37.0 | 3.26e-01 | 70.0% | 44.7% |
| 3640057 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.54 | 45.0 | 3.15e-01 | 95.0% | 89.8% |
| 4045576 | 4.1.1.161 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4178 | 0.54 | 37.0 | 3.69e-01 | 75.0% | 67.7% |
| 4100425 | 11.1.4.90 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF4550 | 0.54 | 38.0 | 3.00e-01 | 76.7% | 34.6% |
| 3516854 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 39.0 | 3.29e-01 | 81.7% | 100.0% |
| 4990492 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 37.0 | 3.96e-01 | 73.3% | 100.0% |
| 4991994 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.74e-01 | 71.7% | 92.7% |
| 5077640 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 37.0 | 3.81e-01 | 76.7% | 78.2% |
| 3786329 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.53 | 34.0 | 3.55e-01 | 70.0% | 72.7% |
| 4961380 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.52 | 41.0 | 3.23e-01 | 91.7% | 39.3% |
| 4946882 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 37.0 | 3.82e-01 | 80.0% | 89.1% |
| 3518995 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 38.0 | 2.84e-01 | 81.7% | 32.6% |