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ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00256
Bact-VirERMGT119_2_scaffold_6_prodigal-single.1__X__X__00256
Identity
- Kingdom:
- phage
Quality
68.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-61
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2guzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.71 | 58.0 | 5.26e-01 | 95.9% | 71.8% |
| 3hjlA03 | 1.20.5.2020 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.70 | 51.0 | 5.42e-01 | 91.8% | 95.1% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.70 | 60.0 | 4.42e-01 | 100.0% | 54.3% |
| 7a8rA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 59.0 | 3.89e-01 | 100.0% | 64.8% |
| 2gtvX00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.60 | 51.0 | 4.10e-01 | 100.0% | 77.9% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 3.90e-01 | 75.5% | 95.3% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 47.0 | 3.89e-01 | 100.0% | 67.9% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 45.0 | 4.23e-01 | 85.7% | 68.3% |
| 2oyyA00 | 6.10.80.10 | Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP) | 0.53 | 40.0 | 3.56e-01 | 81.6% | 85.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955677 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.83 | 74.0 | 4.38e-01 | 98.0% | 17.3% |
| 3258047 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.77 | 53.0 | 3.75e-01 | 73.5% | 25.3% |
| 3948449 | 639.1.1.1 ↗ | alpha arrays › HHA-like › Hemolysin expression modulating protein HHA › Hemolysin expression modulating protein HHA › HHA | 0.75 | 65.0 | 5.68e-01 | 100.0% | 64.9% |
| 4593927 | 6096.1.1.1 ↗ | a+b two layers › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB › DUF3410 | 0.71 | 49.0 | 3.96e-01 | 73.5% | 36.0% |
| 3267614 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.64 | 43.0 | 4.66e-01 | 81.6% | 87.5% |
| 4930182 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.58 | 50.0 | 3.39e-01 | 98.0% | 83.6% |
| 3360612 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.53 | 46.0 | 3.52e-01 | 100.0% | 97.5% |