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ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00261
Bact-VirERMGT119_2_scaffold_6_prodigal-single.1__X__X__00261
Identity
- Kingdom:
- phage
Quality
97.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-106
Domain cluster:
rep: IMGVR_UViG_3300006894_000024-3300006894-Ga0079215_1000068718__D13-111
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26948.1 best | DUF8296 | 89.5 | 3.50e-25 | 100.0% | 95.2% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 27.0 | 3.27e-01 | 82.7% | 68.8% |
| 3o66B01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 39.0 | 3.42e-01 | 78.8% | 97.0% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 30.0 | 3.27e-01 | 86.5% | 67.4% |
| 4z7eA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 38.0 | 3.35e-01 | 78.8% | 95.2% |
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 30.0 | 3.73e-01 | 96.2% | 96.8% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 30.0 | 3.46e-01 | 93.3% | 80.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005290 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.56 | 36.0 | 4.23e-01 | 78.8% | 97.1% |
| 3648332 | 148.1.3.284 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF4371 | 0.53 | 38.0 | 3.54e-01 | 98.1% | 58.5% |
| 4961908 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.53 | 36.0 | 3.95e-01 | 81.7% | 90.0% |
| 4069305 | 101.1.2.104 ↗ | alpha arrays › HTH › HTH › winged helix domain › SelB-wing_3 | 0.51 | 31.0 | 3.02e-01 | 94.2% | 53.0% |