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ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00296

Bact-Vir

ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00296

Identity

Kingdom:
phage

Quality

78.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 69-183
PDB
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.82 77.0 6.22e-01 99.1% 97.5%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.81 76.0 6.76e-01 100.0% 99.4%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.81 76.0 6.50e-01 100.0% 96.5%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.80 71.0 6.37e-01 93.0% 76.7%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.78 59.0 5.94e-01 100.0% 79.1%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.74 69.0 5.46e-01 100.0% 84.0%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.72 64.0 5.46e-01 99.1% 93.1%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.70 36.0 4.83e-01 71.3% 94.9%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.70 65.0 5.83e-01 100.0% 92.3%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.69 62.0 4.74e-01 96.5% 85.2%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.68 58.0 4.69e-01 100.0% 50.7%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.67 59.0 4.04e-01 99.1% 45.7%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 56.0 5.14e-01 90.4% 97.3%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 55.0 5.13e-01 88.7% 96.5%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.66 55.0 5.29e-01 97.4% 78.6%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.65 59.0 4.12e-01 99.1% 54.5%
2cw9A00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 51.0 4.40e-01 83.5% 76.9%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 40.0 4.86e-01 80.9% 94.7%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 53.0 4.51e-01 86.1% 88.3%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.65 57.0 4.40e-01 95.7% 53.0%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 50.0 4.87e-01 81.7% 96.9%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.65 56.0 4.13e-01 94.8% 66.0%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.64 53.0 5.52e-01 99.1% 95.3%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.64 56.0 4.29e-01 97.4% 50.9%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.63 57.0 4.17e-01 96.5% 70.6%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 52.0 4.91e-01 88.7% 95.7%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 51.0 4.97e-01 86.1% 99.2%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.62 55.0 4.71e-01 100.0% 89.6%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.62 56.0 4.21e-01 99.1% 52.3%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.61 57.0 3.95e-01 99.1% 46.4%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.66e-01 87.0% 93.1%
4it7A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 47.0 4.89e-01 81.7% 97.2%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 46.0 4.44e-01 79.1% 93.7%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.60 52.0 3.38e-01 93.9% 24.2%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 4.50e-01 81.7% 99.2%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.59 54.0 3.33e-01 98.3% 77.4%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.59 50.0 3.26e-01 93.9% 32.2%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.59 48.0 3.74e-01 90.4% 44.1%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.57 50.0 3.14e-01 96.5% 25.1%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 45.0 4.14e-01 87.0% 69.0%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 4.29e-01 87.8% 83.8%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 44.0 4.06e-01 87.0% 65.3%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.56 49.0 3.50e-01 97.4% 42.5%
1yc9A02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.54 37.0 4.26e-01 71.3% 97.6%
3v89A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 48.0 3.03e-01 97.4% 32.6%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 47.0 3.07e-01 97.4% 24.7%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 45.0 4.11e-01 93.0% 68.4%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.53 44.0 2.99e-01 88.7% 73.8%
5fokA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.53 47.0 3.01e-01 95.7% 30.1%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 40.0 3.79e-01 93.9% 64.8%
2pfcA00 3.10.129.30 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain 0.52 48.0 4.28e-01 100.0% 96.9%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.51 45.0 3.36e-01 95.7% 60.6%
1cbyA00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.51 39.0 3.19e-01 81.7% 81.1%
3kg7B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.50 41.0 3.10e-01 88.7% 83.2%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.50 43.0 2.94e-01 96.5% 69.2%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.84 80.0 6.85e-01 100.0% 91.2%
200662 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.83 77.0 6.21e-01 99.1% 97.6%
4417262 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.82 76.0 6.57e-01 97.4% 74.9%
3838829 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.82 78.0 6.46e-01 100.0% 80.5%
3964096 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.81 77.0 6.54e-01 100.0% 88.6%
3838975 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.81 74.0 6.21e-01 97.4% 76.2%
3840054 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.80 76.0 7.02e-01 100.0% 92.9%
3838164 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.80 75.0 6.30e-01 100.0% 77.3%
4299005 5084.1.1.21 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TSA 0.80 75.0 6.21e-01 100.0% 86.3%
4285298 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.79 74.0 6.16e-01 100.0% 98.4%
3838398 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.78 72.0 6.11e-01 98.3% 75.0%
3839285 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.78 69.0 5.79e-01 93.9% 73.5%
3189800 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.75 58.0 5.38e-01 81.7% 100.0%
3838321 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.75 66.0 5.34e-01 96.5% 71.6%
3164124 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.74 66.0 6.59e-01 97.4% 96.7%
145377 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.73 67.0 6.07e-01 99.1% 98.0%
3980016 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.73 64.0 5.96e-01 93.9% 79.3%
3571697 883.1.1.1 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.70 62.0 5.22e-01 98.3% 80.0%
2724175 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.69 62.0 4.78e-01 97.4% 63.5%
3716842 243.1.1.86 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_MEX67 0.67 48.0 4.25e-01 74.8% 58.2%
3965061 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.66 58.0 4.49e-01 96.5% 73.8%
2834683 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.66 59.0 4.14e-01 100.0% 50.0%
4669999 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.66 59.0 4.35e-01 98.3% 44.4%
1282324 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 51.0 4.84e-01 82.6% 95.5%
4582939 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.64 58.0 4.18e-01 99.1% 78.4%
3803010 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.62 56.0 4.33e-01 98.3% 75.3%
4419521 243.1.1.108 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2_YvbJ 0.62 49.0 4.71e-01 85.2% 100.0%
4873102 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 55.0 5.28e-01 95.7% 88.5%
3387368 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 53.0 4.15e-01 97.4% 67.0%
4184524 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.61 54.0 3.87e-01 98.3% 57.4%
3782878 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.61 56.0 3.90e-01 100.0% 41.1%
3717466 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.58 48.0 4.09e-01 89.6% 70.5%
3064472 5084.5.2.2 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › Alginate_exp 0.58 52.0 3.49e-01 99.1% 47.9%
4865042 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.58 49.0 3.25e-01 93.9% 26.8%
4319395 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.58 48.0 3.37e-01 88.7% 91.7%
3964265 5084.1.1.43 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter 0.57 50.0 4.69e-01 98.3% 94.5%
4064323 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.57 53.0 3.55e-01 100.0% 42.0%
4025435 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.57 45.0 3.82e-01 90.4% 51.1%
3787225 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.57 47.0 3.95e-01 89.6% 62.1%
3326287 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.56 46.0 4.62e-01 89.6% 91.7%
4533056 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.56 52.0 3.48e-01 100.0% 48.0%
1716664 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.56 51.0 3.40e-01 98.3% 38.7%
1760440 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.55 48.0 3.17e-01 97.4% 27.4%
3173251 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.55 45.0 4.00e-01 90.4% 69.4%
4524066 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.55 46.0 2.98e-01 93.0% 35.8%
3808882 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.55 44.0 3.92e-01 89.6% 66.3%
4180622 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.54 48.0 3.47e-01 96.5% 44.6%
3875809 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.54 41.0 3.63e-01 85.2% 55.8%
4066147 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.54 48.0 3.47e-01 99.1% 43.5%
2755875 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.53 47.0 3.07e-01 97.4% 37.5%
3933957 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.53 43.0 3.93e-01 89.6% 69.4%
3056279 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.53 40.0 3.58e-01 87.8% 56.4%
4664957 5084.5.2.0 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like 0.53 45.0 3.11e-01 93.0% 31.7%
4976957 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 43.0 3.65e-01 90.4% 93.3%
3515197 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.51 40.0 3.57e-01 91.3% 58.2%